Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1620 ATGGAAGAGAAAAACCTAGTGGAAATCACAAATGAAACAAGTCCTCAACCCATTGGAAAGGTAGAAAAAGATTCTTTTACCTTTGAGAGTGAAGAAGATTGTGAAAATCACTCAGTGGGGTCAGAGACCCAAAATGTAGACTGTGATAGCCTTGAGTTTAGCAACAAGAAACAAGATGATATATTGAACGATGTGACTTCTCAAGCTATTCAAAATTTGGAAGGAGATGCTTTTATTGGTCATGATGATGAAATTTTGGAAGATCATGAGAAAGAACCGAAGGAGATGAAAATTCAAGATATTGGTCATGATCATGATGACCCTAATAAGTTTGACAATGAGCAAGACCATATAAATGAGGTGATAGATGTAGAGTTGAGTAGTCATGAGGAAACAAAAGACAATGGGACAATAGAATCCCAATTAGCTCAAAGAGAGGGTGACAGTTGTGATTTGCAGTGTGAATCTCAACAAGAAAATTTAGAGAGTACTAGTACAGTTTCATGTGACTTGTTTCAAAATGAGCATGAAATTAGTGATTCTATGGAATCCAAAATTCAAGTTGATATTGTTAGACAAGAGGATTTAGATGTTAACATAGACACCAATGTGGATTTTGAGGATAAAAATCAAGAAATAAGTCTATATAATGATTCTGAACACCATGGCTTAGCCATAGAGGATGATGCCAATAAAAGCATGGAATATGCACAACAAATGAATCAAAAGACAGAATGCACTTCAAAGGACACTAGTTTGGAGCCTGAAGTAGGTGGATATGATGTTCATAGCACTGAAAATGGCTGCAATTCAGAGGCACCACGTGTCATTGAGAGAGCAACTTCTCTTAGAAACTTTGTTAGGGAGAAAGGTATATTTGCTGTCTCAATTATGCTGCGCCACCTTTCTGGAAGAAGAAACGAACATGCTATGGATAATTCTACTGATATTGGTGAAACCAGAGAGGTTTATAATGAGAAGACAACAATAGTGGAGAGAACAACTTGGAACCCCTTAAACTACTTCAGAATGTCATTTGATGTTGATGCTGAAAACAAAATTGTACAAAGGGAGGAACCAATAACCGAAGGTCCGCCACTACCTATAGCCATGAAAGGGATGATCATAGTGTACACAAGACTAAGGTGCCAAGAATGTAAAGAGGTTAGGAAGTTTTTGTATATGAAAAGGCTTAGATATGTTGAAATCAACATTGATGTGTATCCAAGTAGGAAGATGGAGTTGGAGAAGAATTCTAGTTCTACTTCTGTTCCTAAGGTTTTTTTCAATGAAATGCTTATTGGAGGCTTAAGCACACTAAAGTCCTTAGATGAGTCTGGAAACCTTGATGAGAAGATTGACTACCTTGTTGAGGAAGCACCATCATTGATTGAATTCCCAGTTCCACCACTCTCTGGAGAGGATGATGCTTCTAGTAATGGTGCACTTGATGAAATGGCTCTGATTGTTCGCAAAATGAAAGAATGCATTGTTGTCAAGGATCGGTTTTACAAAATGAGAAGGTTTACTAACTGCTTTCTTGGCTCTGAAGCTGCTATTGATTTTGCACGAAAACTTGCCAGCAAACTCTTCTTTCAACATGTTCTCGATGAAAATCTATTTGAGGATGGTAATCACATATATCGATTTTTAGATGATGATCCATCAGTGGCATCTTTGTGTTTCAACATTCCAAGGGGGATAATTACTGTGAAACCTAAGCCTATGACAGAAGTTGCATCGAGGTTGAGGCTTTTGTCTTATGCAATGTTTGAAGCCTATGCCTCTGAAGATGGACAGCATGTGGACTACAGAAAAAAGCTTGCTTTTTTTATCAATCTGTATAATATGATGTCCATCCATGCAATCTTAGTATGGGGTCACCCTTCGGGGGCACTAGAAAGAAGAAAATTGTTTGGAGATTTTAAATATATCATTGGTGGATCCACTTACTCACTATCAGTTATTCAAAATGGCATTTTGAGGGGGAACCAACGAGCACCATATTCCTTTATGAAACCATTTGGTGCAAAAGATAAACGTTTAAAGTTTAGGAGAGAGAAACACATTCAAAATGACGCCATTTTGAAATTCGAAACCCCCAAAACTTAA 2112 0.3741 MEEKNLVEITNETSPQPIGKVEKDSFTFESEEDCENHSVGSETQNVDCDSLEFSNKKQDDILNDVTSQAIQNLEGDAFIGHDDEILEDHEKEPKEMKIQDIGHDHDDPNKFDNEQDHINEVIDVELSSHEETKDNGTIESQLAQREGDSCDLQCESQQENLESTSTVSCDLFQNEHEISDSMESKIQVDIVRQEDLDVNIDTNVDFEDKNQEISLYNDSEHHGLAIEDDANKSMEYAQQMNQKTECTSKDTSLEPEVGGYDVHSTENGCNSEAPRVIERATSLRNFVREKGIFAVSIMLRHLSGRRNEHAMDNSTDIGETREVYNEKTTIVERTTWNPLNYFRMSFDVDAENKIVQREEPITEGPPLPIAMKGMIIVYTRLRCQECKEVRKFLYMKRLRYVEINIDVYPSRKMELEKNSSSTSVPKVFFNEMLIGGLSTLKSLDESGNLDEKIDYLVEEAPSLIEFPVPPLSGEDDASSNGALDEMALIVRKMKECIVVKDRFYKMRRFTNCFLGSEAAIDFARKLASKLFFQHVLDENLFEDGNHIYRFLDDDPSVASLCFNIPRGIITVKPKPMTEVASRLRLLSYAMFEAYASEDGQHVDYRKKLAFFINLYNMMSIHAILVWGHPSGALERRKLFGDFKYIIGGSTYSLSVIQNGILRGNQRAPYSFMKPFGAKDKRLKFRREKHIQNDAILKFETPKT 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1620 703 ProSiteProfiles Glutaredoxin domain profile. 363 460 - -
Aed3g1620 703 MobiDBLite consensus disorder prediction 1 47 - -
Aed3g1620 703 Gene3D Glutaredoxin 370 455 - -
Aed3g1620 703 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 96 606 - -
Aed3g1620 703 Pfam Protein of unknown function, DUF547 604 681 IPR006869 -
Aed3g1620 703 MobiDBLite consensus disorder prediction 24 38 - -
Aed3g1620 703 Gene3D - 484 588 IPR036388 -
Aed3g1620 703 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 607 684 - -
Aed3g1620 703 SUPERFAMILY Thioredoxin-like 375 454 IPR036249 -
Aed3g1620 703 Pfam Glutaredoxin 375 433 IPR002109 -
Aed3g1620 703 CDD DEP 489 549 - -
Aed3g1620 703 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 96 606 - -
Aed3g1620 703 SUPERFAMILY "Winged helix" DNA-binding domain 485 560 IPR036390 -
Aed3g1620 703 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 607 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1620 Aed-Chr3 20745538 20748905 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1620 - - ccaj:109814814 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1620 3 20745538 20748905 Aed3g1620 3 20745538 20748905 ECH
Aed3g1620 3 20745538 20748905 Aed10g0242 10 1969014 1973126 PCT