Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0242 ATGGAAAATCAACAGTTAGTGGAGACAAATGGAGTAGGTAACCTGCGAGTAGGTGATTTGGCAATTGATCAGCAAAAACAATCAAAGGAGGCGAAGGTTGAAATTGGTCATGATGGCCTCGAGTCAGACGATAAATTAGATGATATATCAGACCAGATAAATGATGAGAGTAGGGATTTGGAATCTGGAACTCAACCAGAAAACTTAGAGACCAAATCTGAAACTGAAGTCAGCACTGATAAAAAGGAGGATTCTGGTGATAAGATGGGTGCTGGTGGAGATTTGGAGCCTATAATTCAAGAAACAAATGTAGATGGTAATTCTGGACAGAGTGACTTGGCTAAAGAAGAGGGTGATAGGGAATCAATGCAGACATTTGATAAGTCAGATGAAATTCCTAGCGAGGACCACAATTTGGAGCCTGTATTTGATGGAACAGAAGTTCCAGGGATGGAAGCTAACCGGAGTATGTCTGGCCGTAGGTGGGATGATTCCGACCCTCCAGGTGTGGTTGAGAAGGCTGTGGCTCTCAAGAATTTTGTTAAGGAGAAGAGTGCTGTGGCAGTCTCCACCATGATGCGTCGCCTATCTGGGAAAAGAGATGAAGCTGCTGTGGATAATGCTGATGATGAAGGTAAGGATGCTTCAGACATCCCGAAAGTTGGTGAAACCAAAGTGGCATCTGAGAAGGCAGTGGAGAAATTTGACTGGAATCTCTTACATTACATCAAGAAGAAATCTGATGTTGGTGTGGAAAACAAAACTGAGCAGAGGGACTCAATAGCCATGAAAGGAAGGATTATACTGTACACAAAACTAGGGTGCCAAGAATCTAAAGAGATTAGGCTATTTTTGCGTACGATAAGGCTTAGATATGTTGAAATCAACATAGATGTGTACCCCGGAAGAAAGATTGAGCTGGAGAAGATTTCTGGATCTGCTTCTGTACCAAAGGTTTTTTTTAATGAAATACTAATTGGAGGCTGGAATGAGCTAAAAACCCTGGTTGAGTCTGGAAAGCTTGATGAGAAGGTTGACTTTCTTATTACTGAAGCACCATTATTTGAGGCCCCATCACCACCTCTCCCTGGAGAGGATGATGTGCCCAGTAGTGGACCACTTGATGAATTGGCAATTATTGTCCGCAAAATGAAAGAATCTATTACTGTGAAGGATCGGTTGTATAAAATGCGCAGGTTCACTAATTCTTTTCTTGGCTCAGAAGCTATTGACTTCTTATCAGAAGATCAATATTTGGAAAAGCCAGAGGCTGTTGAGTTTGCACGAAAGCTTGCTGATAAACTCTTCTTTCGACATGTTCTTGATGAGGATATATTCGAGGATGGAAATCACTTGTATCGGTTTTTGGATGATGACCCAATCGTGGTGTCACAGTGTCACAACATTACTAGAGGCATAATTACTATGAAGCCCAAGCCTTTAGCAGAAATTGCATCAAGATTGAGGTTTCTGTCTCGAGCTATGTTTGAAGCCTATGCTTATGAAGATGGACGTCGTGTTGATTATACAAGTATACATGGAAGTGAGGAGTTCGCAAGGTATCTGAGAATAGTCGAAGAGCTCCAAAGAGTGGAAATAGTGGACTCATCTAGAGAAGAGAAGCTTGCGTTCTTTATTAATCTTTATAATATGATGGCCATCCATGCAATCTTAGTATTGGGCCATCCAGATGGAGCACTGGAAAGAAGGAAATTATTTAGTGAGTTCAAATATGTTATCGGTGGGTCCACCTACTCACTTTCAGCTATTCAAAATGGCATATTGAGGGGAAACCAGCGACCGCCATATAACCTTAAGAAGCCATTTGGTGCAAAAGATAAACGCTCGACAGTGGCACTTCCTTACCCTGAGCCTCTTATTCATTTTGCTTTGGTATATGGTACCTGCTCTGGACCTGCACTTCGGTGCTACTCTCCTGGAAAAATTGATGAAGAGTTATTGGATGCAGCCCGTAATTTTTTGAGAAATGGAGGCATTGTAGTTGATTTGACTGCAAAGTCTGTAAATGCCAGTAAGATCCTAAAATGGTATAGTGTAGATTTTGGCAAGAACGAGGTAGAGGTGATAAAGCATGTTTCAAACTACTTAGATTCAGCTGATTCAGAAGTGTTGTTGGACCTACTTGCTACTTCCGAGTTGAAGGTGACATATCAGCCTTATGACTGGGGCTTGAACTGCTAG 2202 0.4173 MENQQLVETNGVGNLRVGDLAIDQQKQSKEAKVEIGHDGLESDDKLDDISDQINDESRDLESGTQPENLETKSETEVSTDKKEDSGDKMGAGGDLEPIIQETNVDGNSGQSDLAKEEGDRESMQTFDKSDEIPSEDHNLEPVFDGTEVPGMEANRSMSGRRWDDSDPPGVVEKAVALKNFVKEKSAVAVSTMMRRLSGKRDEAAVDNADDEGKDASDIPKVGETKVASEKAVEKFDWNLLHYIKKKSDVGVENKTEQRDSIAMKGRIILYTKLGCQESKEIRLFLRTIRLRYVEINIDVYPGRKIELEKISGSASVPKVFFNEILIGGWNELKTLVESGKLDEKVDFLITEAPLFEAPSPPLPGEDDVPSSGPLDELAIIVRKMKESITVKDRLYKMRRFTNSFLGSEAIDFLSEDQYLEKPEAVEFARKLADKLFFRHVLDEDIFEDGNHLYRFLDDDPIVVSQCHNITRGIITMKPKPLAEIASRLRFLSRAMFEAYAYEDGRRVDYTSIHGSEEFARYLRIVEELQRVEIVDSSREEKLAFFINLYNMMAIHAILVLGHPDGALERRKLFSEFKYVIGGSTYSLSAIQNGILRGNQRPPYNLKKPFGAKDKRSTVALPYPEPLIHFALVYGTCSGPALRCYSPGKIDEELLDAARNFLRNGGIVVDLTAKSVNASKILKWYSVDFGKNEVEVIKHVSNYLDSADSEVLLDLLATSELKVTYQPYDWGLNC 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0242 733 SUPERFAMILY "Winged helix" DNA-binding domain 375 461 IPR036390 -
Aed10g0242 733 MobiDBLite consensus disorder prediction 25 167 - -
Aed10g0242 733 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 37 732 - -
Aed10g0242 733 Gene3D - 377 499 IPR036388 -
Aed10g0242 733 SMART DEP_3 384 457 IPR000591 GO:0035556
Aed10g0242 733 MobiDBLite consensus disorder prediction 73 90 - -
Aed10g0242 733 Pfam Protein of unknown function, DUF547 537 661 IPR006869 -
Aed10g0242 733 MobiDBLite consensus disorder prediction 25 65 - -
Aed10g0242 733 Gene3D Glutaredoxin 262 347 - -
Aed10g0242 733 ProSiteProfiles Glutaredoxin domain profile. 255 352 - -
Aed10g0242 733 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 37 732 - -
Aed10g0242 733 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 388 455 IPR000591 GO:0035556
Aed10g0242 733 MobiDBLite consensus disorder prediction 112 142 - -
Aed10g0242 733 ProSiteProfiles DEP domain profile. 384 457 IPR000591 GO:0035556
Aed10g0242 733 CDD DEP 376 454 - -
Aed10g0242 733 Pfam Glutaredoxin 267 323 IPR002109 -
Aed10g0242 733 SUPERFAMILY Thioredoxin-like 256 345 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0242 Aed-Chr10 1969014 1973126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0242 - - gmx:100820242 1292.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0242 10 1969014 1973126 Aed10g0242 10 1969014 1973126 ECH
Aed3g1620 3 20745538 20748905 Aed10g0242 10 1969014 1973126 PCT