Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0808 ATGGCCACACAGAGCGTCTGCTTCAGAGGAACCACCTTCCCCATTTGCCCTTCCAATGTCACCAATACTAGAAACATCAGGAGCTCATATTGGAGGCCTGCACAAGCATCTGTGAAGCCCAATTTCCATCTCCCAATGCGCAGTTTTGAGTTAAAAAATAGGACTTCTCCGGAAGACATTAAGTCTCTGAGATTGATAACTGCCATTAAAACTCCGTACCTGCCTGATGGTCGATTTGATCTTGAAGCATATGATGACTTGGTGAATATGCAGATTGGACAAGGGGCCGAAGGTGTTATTGTTGGTGGGACAACTGGTGAAGGCCAATTAATGAGCTGGGAAGAGCACATAATGCTTATTGCTCATACAGTCAACTGTTTTGGTGGGAAGATTAAGGTTATTGGAAATACTGGAAGCAACTCCACCAGGGAAGCAATTCATGCCACCGAACAAGGTTTTGCTGTTGGAATGCATGCTGCCCTTCACATAAACCCTTACTATGGAAAAACCTCCTTGGATGGCATGGTTGCTCACTTTCAAAGTGTGCTTTCCATGGGGCCTACAATAATTTACAATGTGCCTTCACGGACCGGTCAAGACATTCCTCCGCATGTAATTCAAACCTTAGCTGAAAGTGCAAACCTGGCTGGTGTCAAGGAGTGTGTGGGAAATGACCGGATCAAGCAGTATACAGATGATGGAATTGCTGTGTGGAGTGGGAATGATGATCAATGCCATGATGCTAGATGGGGTTTTGGGGCTACTGGAGTGATATCTGTTGCAAGCAACCTTGTTCCGGGTTTAATGCGAGATCTCATGTTTGGTGGTGTAAACCCTACACTAAATTCTAAGCTCTTGCCTCTGATTGACTGGCTTTTCCACATGCCAAACCCCATTGGTTTGAACACTGCCCTTGCTCAACTTGGGGTTGTCAGACCCGTTTTTCGGCTACCGTTTGTACCTCTCCCCATGGACAAAAGAATAGAGTTTGCCAATTTGGTGAAGGGAATTGGTCGAGAGCATTTTGTTGGAGATAAAGATGTTGAGGTTCTTGATGATGATGACTTTTTCTTAGTTAGTCGTTATTAA 1089 0.449 MATQSVCFRGTTFPICPSNVTNTRNIRSSYWRPAQASVKPNFHLPMRSFELKNRTSPEDIKSLRLITAIKTPYLPDGRFDLEAYDDLVNMQIGQGAEGVIVGGTTGEGQLMSWEEHIMLIAHTVNCFGGKIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLDGMVAHFQSVLSMGPTIIYNVPSRTGQDIPPHVIQTLAESANLAGVKECVGNDRIKQYTDDGIAVWSGNDDQCHDARWGFGATGVISVASNLVPGLMRDLMFGGVNPTLNSKLLPLIDWLFHMPNPIGLNTALAQLGVVRPVFRLPFVPLPMDKRIEFANLVKGIGREHFVGDKDVEVLDDDDFFLVSRY 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0808 362 ProSitePatterns Dihydrodipicolinate synthase signature 1. 98 115 IPR020624 GO:0016829
Aed3g0808 362 Gene3D Aldolase class I 57 362 IPR013785 -
Aed3g0808 362 PANTHER DIHYDRODIPICOLINATE SYNTHASE-RELATED 12 362 - -
Aed3g0808 362 PRINTS Dihydrodipicolinate synthase signature 131 149 IPR002220 GO:0016829
Aed3g0808 362 PRINTS Dihydrodipicolinate synthase signature 95 116 IPR002220 GO:0016829
Aed3g0808 362 PRINTS Dihydrodipicolinate synthase signature 163 179 IPR002220 GO:0016829
Aed3g0808 362 PRINTS Dihydrodipicolinate synthase signature 186 203 IPR002220 GO:0016829
Aed3g0808 362 TIGRFAM dapA: 4-hydroxy-tetrahydrodipicolinate synthase 65 333 IPR005263 GO:0008840|GO:0009089
Aed3g0808 362 PANTHER DIHYDRODIPICOLINATE SYNTHASE 12 362 IPR002220 GO:0016829
Aed3g0808 362 ProSitePatterns Dihydrodipicolinate synthase signature 2. 191 221 IPR020625 GO:0016829
Aed3g0808 362 SMART DHDPS_2 62 338 IPR002220 GO:0016829
Aed3g0808 362 Pfam Dihydrodipicolinate synthetase family 63 335 IPR002220 GO:0016829
Aed3g0808 362 CDD DHDPS 64 334 IPR005263 GO:0008840|GO:0009089
Aed3g0808 362 SUPERFAMILY Aldolase 65 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0808 Aed-Chr3 5756055 5758970 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0808 K01714 - gmx:100788930 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0808 3 5756055 5758970 Aed3g0808 3 5756055 5758970 ECH
Aed3g0808 3 5756055 5758970 Aed2g0852 2 6531736 6536444 PCT