Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0852 AAGCCAACTGTGACGCCCAATTTTCACCACCGTCCAGTGAGCACGTCAGAGGTGAAAAACAACAACAACAACAACAACAACAGAACATCGATTGAGGACATAAGGAGTCTGAGATTGATAACTGCTATTAAAACTCCATACCTACCAAATGGCCAATTTGATCTTGAAGCATATGACAACTTGGTGGATATGCAGATTTCAAATGGTGCTGATGGAATTCTTGTTGCTGGCTCAACCGGTGAAGGTCAATTAATGTCATGGGAAGAACAAACCATGCTCATTGCACACACAGCCAACTGTTTTGGTGACAAGATCAAGATTATTGGCAATGCAGGAAGCAACTGCACATCAGAGGCAATCAAGGCCACTGAGAGAGGTTTTGCTGTTGGAATGAATGCTGCAATGCACATAAACCCTTACTACGGCAAAACCTCCTTGGATGGCCTTGTTGCTCACTACAACAATGTGCTTTCCATAGGGCCCTGCATCATATACAACATACCATTGCGAACCGCGCAAGATGTTCCTCCCAGCGTGGTTCGAATCCTGGTGCAAAATCCTAACTTGGTTGGTGTCAAGGAGTGTGAGGGAAATGTGAGGATCAAGCAGTATGCAAGCGAGGGAATTGCAGTGTGGTCTGCAAATGATGAGGAGTGCCATGATGCTAGATGGGATTGTGGAGCCGTCGGAGTTCAATCTGTTGTCAGCAACTTAGTTCCTGGCTTGATGAGAGAACTCATGTTTGAGGGAAAGAATCATGCACTGAACTCAAAGCTCATGCCACTGTTTGATTGGCTTTGTCTTGAGCCAAATCCAATTCCTTTGAACACTGCTCTTGCTCAACTTGGGGTTATCAAGCCAGTGTTTAGGCTCCCACATGTGCCTCTGACCGTGGAGAAAAGGATTGAGTTTGTCAACTTGGTGACGCAAATCGGTAGGGAACATTTTGTTGGAGAAAAAGATGTTAAAGTTCTTGATAACAATGAGAACACATCATGCTGGAAGCCTCCACAAGCATTTGCAAGAAACGATTTTCGTGTCCCAATGAGCAGCTCATCGGTAAAAAATAGTTTTATAATATCAAATGGTGTTGAAGGAATTCTTGTTGGTGGCACAACAGGTGAAGGCCAACTAATGACATGGGAAGAACAAATAATGCTTATTGCACATACAGTCAACAGTTTTGGCGACAAAGTTAAGGTTGTTGGCAATGCTGGAAGCAACTGCACATCAGAGGCAATCAAGGCCACTGAGAGAGGTTTTGCTGTTGGAATGGATGCTGCACTTCACATAAACCCTTACTATGGCAAAACCTCATTGGCTGGTTTAGTTGCTCACTACAACAGTGTTCTTTCCATTGGCCCTATCATCATATACAACATACCAACAAGGACTAACCAAGATGTTCCACCCAGTGTGGTTCAAAAATTGGCGAAAAGTCCTAACTTTGTTGGTGTTAAGGAATGTGTTGGAACTGAGAGGATCAAGCACTACACAGATCAAGGAATTGTTGTGTGGACAGGAATTGATACAATTAGCCATGATGGCAGATGGGATTTTGGTGCTGTTGGAGTTCAATCTGTTGCCGCGAACTTGGTTCCCGGTTTGATGAGACAACTCATGTTTGAGGGCAAGAATGCTACACTGAATTCAAAGGTGGTTCCTCTGTTTGATTGGCTGTCTCATGAGCCTGTCCCTATTGCTTTGAACACTGCTCTTGCTCAACTTGGTGTCATCGAACCAGTTTTCAGGCTACCACATGTGCCACTGCCTGTGGAGAAAAGGGTGGAGTTTGTGATTTTGGTTAAGGAGATTGGGAGAGAGCATTTTGTTGGAGAGAAAGATGTTGAAGTTCTTGGTGATGATGAGTTTATCTTAGTTGGTAGATATTAA 1893 0.4385 KPTVTPNFHHRPVSTSEVKNNNNNNNNRTSIEDIRSLRLITAIKTPYLPNGQFDLEAYDNLVDMQISNGADGILVAGSTGEGQLMSWEEQTMLIAHTANCFGDKIKIIGNAGSNCTSEAIKATERGFAVGMNAAMHINPYYGKTSLDGLVAHYNNVLSIGPCIIYNIPLRTAQDVPPSVVRILVQNPNLVGVKECEGNVRIKQYASEGIAVWSANDEECHDARWDCGAVGVQSVVSNLVPGLMRELMFEGKNHALNSKLMPLFDWLCLEPNPIPLNTALAQLGVIKPVFRLPHVPLTVEKRIEFVNLVTQIGREHFVGEKDVKVLDNNENTSCWKPPQAFARNDFRVPMSSSSVKNSFIISNGVEGILVGGTTGEGQLMTWEEQIMLIAHTVNSFGDKVKVVGNAGSNCTSEAIKATERGFAVGMDAALHINPYYGKTSLAGLVAHYNSVLSIGPIIIYNIPTRTNQDVPPSVVQKLAKSPNFVGVKECVGTERIKHYTDQGIVVWTGIDTISHDGRWDFGAVGVQSVAANLVPGLMRQLMFEGKNATLNSKVVPLFDWLSHEPVPIALNTALAQLGVIEPVFRLPHVPLPVEKRVEFVILVKEIGREHFVGEKDVEVLGDDEFILVGRY 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0852 630 ProSitePatterns Dihydrodipicolinate synthase signature 2. 165 195 IPR020625 GO:0016829
Aed2g0852 630 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE 359 630 - -
Aed2g0852 630 SUPERFAMILY Aldolase 39 309 - -
Aed2g0852 630 Pfam Dihydrodipicolinate synthetase family 358 604 IPR002220 GO:0016829
Aed2g0852 630 Pfam Dihydrodipicolinate synthetase family 37 310 IPR002220 GO:0016829
Aed2g0852 630 SUPERFAMILY Aldolase 344 599 - -
Aed2g0852 630 CDD DHDPS 38 308 IPR005263 GO:0008840|GO:0009089
Aed2g0852 630 ProSitePatterns Dihydrodipicolinate synthase signature 1. 72 89 IPR020624 GO:0016829
Aed2g0852 630 PRINTS Dihydrodipicolinate synthase signature 454 471 IPR002220 GO:0016829
Aed2g0852 630 PRINTS Dihydrodipicolinate synthase signature 431 447 IPR002220 GO:0016829
Aed2g0852 630 PRINTS Dihydrodipicolinate synthase signature 363 384 IPR002220 GO:0016829
Aed2g0852 630 PRINTS Dihydrodipicolinate synthase signature 399 417 IPR002220 GO:0016829
Aed2g0852 630 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE 18 329 - -
Aed2g0852 630 TIGRFAM dapA: 4-hydroxy-tetrahydrodipicolinate synthase 39 304 IPR005263 GO:0008840|GO:0009089
Aed2g0852 630 ProSitePatterns Dihydrodipicolinate synthase signature 1. 366 383 IPR020624 GO:0016829
Aed2g0852 630 Gene3D Aldolase class I 30 334 IPR013785 -
Aed2g0852 630 Gene3D Aldolase class I 356 630 IPR013785 -
Aed2g0852 630 ProSitePatterns Dihydrodipicolinate synthase signature 2. 459 489 IPR020625 GO:0016829
Aed2g0852 630 SMART DHDPS_2 36 312 IPR002220 GO:0016829
Aed2g0852 630 SMART DHDPS_2 344 606 IPR002220 GO:0016829
Aed2g0852 630 MobiDBLite consensus disorder prediction 1 29 - -
Aed2g0852 630 PANTHER DIHYDRODIPICOLINATE SYNTHASE 18 329 IPR002220 GO:0016829
Aed2g0852 630 PANTHER DIHYDRODIPICOLINATE SYNTHASE 359 630 IPR002220 GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0852 Aed-Chr2 6531736 6536444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0852 K01714 - gmx:100806626 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0808 3 5756055 5758970 Aed2g0852 2 6531736 6536444 PCT