Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0626 ATGGATAAATCATCCAACTGTGATGAAAAATCTGATGTGGGGTATCACCCTTCTTCACCTTCCAATGCTCCTGCTTTTTCCCCAATGAGTAGAGATTCCTTTGCATATTGCCAAACCTGGACAAGCTCAGAGTCTGAGACTGTAGATGAGAGCAGCTATGCTAGTGAACCTTCACCTTCTCGGGATTCTCTTTCAAAGCTAGGAATGAAGCTGCGCAAGCATTCAATAGATGATAAACTTGGTGGCAGTGATGATCTCTTGGATTCAGCTGAGCTTGAATTGATGAAGGAAAGATTTGCTAAGCTTCTGCTAGGAGAAGACATGTCTGGTAGTGGCAAAGGTGTTTCCTCTGCAGTTACAATCTCAAATGCCATTACCAATCTCTATGCAACTATATTTGGACAAAGTTTAAAGTTGGAGCCACTAAAGCCTGAGAAGAAGGCAATGTGGAAGAGGGAAATGAAGGTTCTTTTATCAGTGTGTGACTACATACAAGAATTTGCTCCAACTGCACAATACTTAGAAGATGGCACAATTGTGGAGATGATGAAAAGCAGGCCAAGGTCAGACATCTATGTCAACCTCCCTGCACTGCAGAAGCTTGACACAATGCTCATAGAAATATTAGATACTTTCCAGGACACTGAATTCTGGTATGCAGAGAACATACCGGGGAATTCGAGCCGATTACGCGGGGCATCGTTTCGAAAAGTTGTTCCAAGGAAAGATGACAAATGGTGGCTGCCAGTTCCTTGTGTTCTTCCTGGTGGCCTCTCTGACAAGTCAAGAAAGCATCTGATAGAGAAAAGGGATTGTGGTAATCAAATTCATAAGGCTGCCATGGCAATAAACAGCAATGTTCTTGCAGAATTAGATATCCCAGAGACGTACATAGATAATCTTCCCAAGCTGAAATTCTATTGCCAAGTGATTGAGGATTCCATAAAATGTGACCCCATAAAGCAAATGTCTTGGAATTTTTCATCAAATTTCATAAGCCTTTTATGGAAGCCACTAATAGCAGCTGAGTCTTGTAGAAAACGGGATGATATAGTTTCAATTAAGAGTGGAAGATCAAGTGTAGGGGACTCAATTTACCACTACATGCATACTGCAGACAAGTTCTCACCTGAACAACTTCTTGACTGTCTCAAAATAAGTTCTGAACATGAAGCACTTGAGCTAACAGACAGGGTTGAATCATCGATGTACACATGGAGACGCAAAGCTTGTCTGGGCCATTCAAAGTCATCATGGAGCAAAGTAAAGGAACTCATGGAAGACACAGACTCTAAGGACAAAAACTACACCTTAGCAGAGAGAGCTGAGTCCTTATTACTTTGCCTGAAGCATAGATATCCTGAACTATCACAAACTTCTTTGGACACATGCAAGATCCAATACAACCGGGTAAGCTTAGCAATCTATGAAGTTGTGTCATTTGATGTAGGGAAAGCAGTGCTAGAGAGTTATTCAAGAGTTTTGGAAGGCCTAGCATTCAACATTGTTGCATGGATTGAAGATGTTCTTTATGTAGATAAATCAATGAGGAACCGAGATGTATAG 1566 0.4132 MDKSSNCDEKSDVGYHPSSPSNAPAFSPMSRDSFAYCQTWTSSESETVDESSYASEPSPSRDSLSKLGMKLRKHSIDDKLGGSDDLLDSAELELMKERFAKLLLGEDMSGSGKGVSSAVTISNAITNLYATIFGQSLKLEPLKPEKKAMWKREMKVLLSVCDYIQEFAPTAQYLEDGTIVEMMKSRPRSDIYVNLPALQKLDTMLIEILDTFQDTEFWYAENIPGNSSRLRGASFRKVVPRKDDKWWLPVPCVLPGGLSDKSRKHLIEKRDCGNQIHKAAMAINSNVLAELDIPETYIDNLPKLKFYCQVIEDSIKCDPIKQMSWNFSSNFISLLWKPLIAAESCRKRDDIVSIKSGRSSVGDSIYHYMHTADKFSPEQLLDCLKISSEHEALELTDRVESSMYTWRRKACLGHSKSSWSKVKELMEDTDSKDKNYTLAERAESLLLCLKHRYPELSQTSLDTCKIQYNRVSLAIYEVVSFDVGKAVLESYSRVLEGLAFNIVAWIEDVLYVDKSMRNRDV 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0626 521 MobiDBLite consensus disorder prediction 44 65 - -
Aed3g0626 521 MobiDBLite consensus disorder prediction 11 29 - -
Aed3g0626 521 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 91 304 IPR005512 GO:0005085
Aed3g0626 521 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 355 517 IPR005512 GO:0005085
Aed3g0626 521 ProSiteProfiles PRONE domain profile. 82 521 IPR005512 GO:0005085
Aed3g0626 521 MobiDBLite consensus disorder prediction 44 62 - -
Aed3g0626 521 Gene3D PRONE domain, subdomain 2 351 468 - -
Aed3g0626 521 Gene3D PRONE domain, subdomain 1 85 324 - -
Aed3g0626 521 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 521 - -
Aed3g0626 521 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 521 IPR038937 GO:0005085
Aed3g0626 521 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0626 Aed-Chr3 4452627 4455576 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0626 - - gmx:100806086 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0626 3 4452627 4455576 Aed3g0626 3 4452627 4455576 ECH
Aed3g0626 3 4452627 4455576 Aed2g0680 2 4950766 4954464 PCT