Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0680 ATGTTTGTTCAGCTAGCCACTGTTCAAATTCAAACCAAAGCCATATTAAAAAGTTTCAATTTCAATAATATGGACAATTCATCAAACTTTGATGAAAACTCAGATGTGGGGTACCAACCTTCATCTCCTTCTGTGGATCAAAATGATCATTCAATCACTGAAACCGTTGGATGCTCCCCCTTCAGTGGCGAATCCTTTGCGTATTGCCGGTCTAATTCGGAGGTCTCGAACTTCTCTGAGCCTGTTGATGACAATAGCTTTGCAAGTGAACCTTCACCTTCTCTATGGACATCTGTGAGACATGGAGCCAGTCAAAAGCTTGATATGATGAGGGAAAGATTTGCAAAACTTCTATTGGGGGAAGACATGTCTGGTGGAGGGAAAGGTGTCTGCACTTCAGTTACAATATCAAATTCAATTACCAATCTCTATGCAACTGTTTTTGGACAAAATTTAAAGTTGGCACCTCTCAAGCCTGAGAAGAAGGCTATGTGGAAAAGAGAAATGAATTGTCTCCTATCTGTGTGTGATTACATAATGATGACAAGCAGACCAAGATCAGATATTTACATCAACCTCCCAGCTTTGCAGAAGCTTGACACAATGCTCATAGAGATATTGGATAGTTTTCAGGATACTGAATTTTGGTATGCGGAGCAAGGGAGCATATCAGGGAATTCAACCCGGTCACGTGGAGGCTCGTTTCGAAGGATTGTTCAGAGGAAAGATGAGAAGTGGTGGCTGCCAGTTCCTTGTGTTCACCCTGGAGGCCTCTCTGATAAGGCAAGGAAACAGTTGAATGAGAAAAGAGACTGTGCTAATCAAATTCATAAAGCAGCTATGGCTATAAATAGCAGTGTTCTTGCAGAGATGGATATCCCAGAAACATATACGTCAAATCTTCCCAAGGATCTCATGGCTGACACAGACAGAAGTGACAAAAACTACATCTTAGCTGAGAGAGCTGAGACTTTGTTGTTTTGCTTGAAGCAAAGATATCCTGAGCTTTCACAAACATCCTTGGATACATCCAAGATTCAATACAACCGGGATGTAGGGAAAGCGATATTAGAAAGCTACTCAAGAGTATTAGAAGGCTTAGCATTCAACATTGTAGCTTGGATTGAAGATGTTCTTCATGCAGATAAATCAATGAGGAACCAAAATGTATAG 1173 0.4092 MFVQLATVQIQTKAILKSFNFNNMDNSSNFDENSDVGYQPSSPSVDQNDHSITETVGCSPFSGESFAYCRSNSEVSNFSEPVDDNSFASEPSPSLWTSVRHGASQKLDMMRERFAKLLLGEDMSGGGKGVCTSVTISNSITNLYATVFGQNLKLAPLKPEKKAMWKREMNCLLSVCDYIMMTSRPRSDIYINLPALQKLDTMLIEILDSFQDTEFWYAEQGSISGNSTRSRGGSFRRIVQRKDEKWWLPVPCVHPGGLSDKARKQLNEKRDCANQIHKAAMAINSSVLAEMDIPETYTSNLPKDLMADTDRSDKNYILAERAETLLFCLKQRYPELSQTSLDTSKIQYNRDVGKAILESYSRVLEGLAFNIVAWIEDVLHADKSMRNQNV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0680 390 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 303 390 IPR038937 GO:0005085
Aed2g0680 390 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 24 302 IPR038937 GO:0005085
Aed2g0680 390 Gene3D PRONE domain, subdomain 2 313 348 - -
Aed2g0680 390 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 303 390 - -
Aed2g0680 390 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 24 302 - -
Aed2g0680 390 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 106 304 IPR005512 GO:0005085
Aed2g0680 390 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 311 386 IPR005512 GO:0005085
Aed2g0680 390 ProSiteProfiles PRONE domain profile. 97 390 IPR005512 GO:0005085
Aed2g0680 390 MobiDBLite consensus disorder prediction 30 50 - -
Aed2g0680 390 Gene3D PRONE domain, subdomain 1 99 308 - -
Aed2g0680 390 Gene3D PRONE domain, subdomain 1 349 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0680 Aed-Chr2 4950766 4954464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0680 - - gmx:100785956 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0680 2 4950766 4954464 Aed2g0680 2 4950766 4954464 ECH
Aed3g0626 3 4452627 4455576 Aed2g0680 2 4950766 4954464 PCT