Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0618 ATGTTAATTATAGAGGATTTGGTTCTTCAAGGAACACCAAAAAGCTTTGGTGTTGTTCTCAGTTTGCATTTCATTGGTGTATTTGGTTGGAGCTTCTTGGAACGGCAACAAATGATGAAGCCTTATATCTGGCTTGAAACATCAGATGGTTCAATCCAACAAGTGGAACAAGAAATTGCAATGTACTGTCCTCTGATTTGTCAAGAAGTAATACAAAAAGGCATGGGATCTTCCAAGAATTGTGCAATATGTCTTCCTCAACGAGTCAGTCCTGCAACGTTGAGCTTAATTCTTGATTATTGTCGTTTTCATCAAGTACCAGGTCGCTCAAACAAGGAACGGAAGTCTTATGATGAGAAATTTGTTAGGATGGACACAAAGAGGCTCTGTGAGTTAACATCTGCTGCAGACAGCCTTCAGTTGAAGCCATTGGTTGATCTTACTAGTCGTGCACTTGCTCGGATAATTGAAGGAAAATCTCCAGAGGAGATACGCGAGATATTTCATCTGCCTGATGATCTTACTGAGGTGTCTGGTGCTTGTGAGAACTCTGAAGAGAAGTTGGAGCCCTTGAAAAATACAACTGATGACCCAAGGATCAGGCTTTTGAATAGATTGTATGCCAAAAAGAGGAAAGAACTAAAAGAGCGTGAGAGGTTGAAGAATGTTGAAGCTGAAGCAGAGCATGTAGATGAACGTTCAGTTGATGACCTTTTGTCTTTTATTAATGGAAATGATGAAGATTCAAAGGGAGTTAAAACTTCTAAGAATAAAAAGAAAAATAGAAGAAAAAAAGAGCAACAGAAGAACTCTTCTCTGAACGAAGCTTCTGAAATGAATAAGAAGGTTGTTGTAAATATTCTGGAAGTGGCAGATTTTGCCCGCCGATTGAATTCTGACTGGCCAGAGAGGATGCAAGAACTTTTATCATCAGGACAAGAAAGAAAGACAATGCTTTTTACTCCCAATGGAAATAGTTTTCTGAGGCGAAATGCTTGA 999 0.3914 MLIIEDLVLQGTPKSFGVVLSLHFIGVFGWSFLERQQMMKPYIWLETSDGSIQQVEQEIAMYCPLICQEVIQKGMGSSKNCAICLPQRVSPATLSLILDYCRFHQVPGRSNKERKSYDEKFVRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKSPEEIREIFHLPDDLTEVSGACENSEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKERERLKNVEAEAEHVDERSVDDLLSFINGNDEDSKGVKTSKNKKKNRRKKEQQKNSSLNEASEMNKKVVVNILEVADFARRLNSDWPERMQELLSSGQERKTMLFTPNGNSFLRRNA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0618 332 Gene3D Potassium Channel Kv1.1; Chain A 36 189 IPR011333 -
Aed3g0618 332 SUPERFAMILY POZ domain 41 105 IPR011333 -
Aed3g0618 332 MobiDBLite consensus disorder prediction 312 332 - -
Aed3g0618 332 PANTHER SKP1-LIKE PROTEIN 20 34 281 - -
Aed3g0618 332 PANTHER SKP1 34 281 IPR016897 GO:0006511
Aed3g0618 332 Pfam Skp1 family, dimerisation domain 142 176 IPR016072 GO:0006511
Aed3g0618 332 SMART skp1_3 40 141 IPR001232 GO:0006511
Aed3g0618 332 SUPERFAMILY Skp1 dimerisation domain-like 112 175 IPR036296 GO:0006511
Aed3g0618 332 Coils Coil 203 223 - -
Aed3g0618 332 MobiDBLite consensus disorder prediction 246 277 - -
Aed3g0618 332 Pfam Skp1 family, tetramerisation domain 42 105 IPR016073 GO:0006511
Aed3g0618 332 Coils Coil 256 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0618 Aed-Chr3 4394346 4400422 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0618 - - gmx:100809439 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0618 3 4394346 4400422 Aed3g0618 3 4394346 4400422 ECH
Aed2g0671 2 4853405 4859528 Aed3g0618 3 4394346 4400422 ECH
Aed3g0618 3 4394346 4400422 Aed2g0671 2 4853405 4859528 PCT