Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0458 ATGAAGCTTACATTAAAAACACCACACGGACACCCACTCCCTTCACCCCAATCCAAGACCCTCCTCAAACCTCGATGCATATTAACCACAACCACGATCCAAACATCTAAACAAGCCAGCAAAAACATACACCTCTCTAATGTAGAAACACGAGAAGCCGCATTAAACTTGGAGAAAATGATAAACTTGGAAGACCATAGTAATAACAATTATTTTCCATCAAAACTTGGGAATCGGTGGAAGGAGTACCATGGCATGAGCAATTGGGACGGTTTGCTAGACCCATTAGACGACAACCTACGTTCTGAAATCCTAAGGTACGGTCATTTCGTGGAAACCGCGTACAAATCCTTCGACTTTGACCCTTCTTCTCCCAACTATGCAAACTCGAAGTTTCCCAAAAAAGCACTTTTAGAACGGTGTGGTTTACCTAACACGGGCTACAAGGTAACAAAATACCTACGTGCAACCTCGGGTATTCAGCTACCTAGTTGGGTGGACAAAGCACCAGCATGGGTAGCGAAACAAACGAGCTATGTTGGATACGTAGCGGTGTGTTGTGACAAGGAAGTTATCAAAAGGCTTGGTCGGCGCGATGTTGTGGTGGCATATAGAGGAACCACCACATGCTTGGAATGGTTGGAGAATTTCCGTGCATCTCTCACCAACCTCCCCATTCCATGCACCACAAAGAGGGCCTTTGAAAAAAATGGAGTCATGGACGGAAGTGGGGCCATGGTGGAAAGCGGATTCTTGAGTCTTTACACCTCCTCACTTCCTGCAAAGACGACATCTTTGCAGGAAATGCTGAGACGGGAGATCTCAAGAATCCTCCGGATGTATCCCGGAGAACAACTGAGCTTGACCGTCACCGGTCATAGTCTGGGGGCGGCATTGGCAACGCTCACGGCGTATGACTTGAAGACTGTCTTTCCCAAACTGTCGGTGACGGTCATCTCTTTTGGCGGGCCCCGTGTCGGGGACCTGAAGTTCCGACGACAGCTTGAGAGGCAAGGGACCAAGGTTTTGCGGATAGTGAACTCCGACGATGTCATCACCAAGGTTCCGGGGTTTGTCTTTGATGATGATGTGGCAACCGGTGGAGGGGTCCATGTGGCGGGATTTCCGAGCTGGATACAGAAGAGAGTGGAGGAGGCACAGTTGGTGTACGCAGAGGTTGGGAGAGAACTACGGTTATGTAGCAGGGATTCTCCGTACCTAGGAAACACGAATGTTGCCACGTGTCATGAGCTCAACACGTATCTGCATCTCGTTGATGGCTTTGTCAGCTCCACGTGTCCCTTCAGAGCCTCAGCGAAGAGGTTCCTCCGTCGTTGA 1338 0.4933 MKLTLKTPHGHPLPSPQSKTLLKPRCILTTTTIQTSKQASKNIHLSNVETREAALNLEKMINLEDHSNNNYFPSKLGNRWKEYHGMSNWDGLLDPLDDNLRSEILRYGHFVETAYKSFDFDPSSPNYANSKFPKKALLERCGLPNTGYKVTKYLRATSGIQLPSWVDKAPAWVAKQTSYVGYVAVCCDKEVIKRLGRRDVVVAYRGTTTCLEWLENFRASLTNLPIPCTTKRAFEKNGVMDGSGAMVESGFLSLYTSSLPAKTTSLQEMLRREISRILRMYPGEQLSLTVTGHSLGAALATLTAYDLKTVFPKLSVTVISFGGPRVGDLKFRRQLERQGTKVLRIVNSDDVITKVPGFVFDDDVATGGGVHVAGFPSWIQKRVEEAQLVYAEVGRELRLCSRDSPYLGNTNVATCHELNTYLHLVDGFVSSTCPFRASAKRFLRR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0458 445 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 34 444 - -
Aed3g0458 445 Pfam Lipase (class 3) 201 358 IPR002921 GO:0006629
Aed3g0458 445 Gene3D alpha/beta hydrolase 79 444 IPR029058 -
Aed3g0458 445 PANTHER PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC 34 444 - -
Aed3g0458 445 CDD Lipase_3 149 363 - -
Aed3g0458 445 SUPERFAMILY alpha/beta-Hydrolases 101 359 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0458 Aed-Chr3 3250641 3251978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0458 25 445 Acyl Lipid Metabolism Gene Families AT2G44810 61.374 2.52e-180 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0458 K16818 - gmx:100800549 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0458 3 3250641 3251978 Aed3g0458 3 3250641 3251978 ECH
Aed2g1760 2 22305743 22307071 Aed3g0458 3 3250641 3251978 PCT