Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1760 ATGAAGCTTACCCCAATGAAACCTCTATACCCTACTTCCCCAACAATCAATATCGTAAAACCTCGGTGCATAACCATAATTAACCAACCATCGAAAGCCCACAATCCACATAACATTGGAAAAAGCGTAGAGAAAACCATATATAACAACTTAGAAAACCATAATTTGTCAACAACATCATTGTCACCATCAAACAACAAAGTTGGAAATAGATGGATGGAGTACCAAGGAGTGAACAACTGGGAAGGTTTACTTGACCCATTGGACAACAATTTACGTGCCGAAATTCTTAGGTATGGCCAATTTGTGGAAGCTGCTTATAAATCCTTTGAATTCGACCCTTCTTCACCCTCCTATGGCTCTTGCAAGTTCCCAACAAAGACCACACTTTTGGAAAAGTGTGGTTTCCCTAACACAGGTTACAACGTTACCAAATTCCTACATGCAACCTCGGGTATTCAGCTACCTCGTTGGTTGCTGAACAAGGCACCAACACCAACATGGGTTTCAACCCAATCCAGCTACATTGGCTATGTTGCTGTGTGTGACAACAAAGAAGAGATCAAAAGACTAGGTCGTAGAGACATTGTTGTTGCATATAGAGGAACAGCCACATGCTTGGAATGGCTTCAAAACTTGCGTGCCACTCTCACCCACCTTCCAATTATGCCATGCAAAAGATCATGGAGACACTTTCACAAGGAGTACCAAATTACAACCCCAATGGTTGAAAGTGGGTTCTTGAGTCTCTACACCTCGTCACCATGCAATTCTGAAAACTCCGTTACGAGTCTTCAGCAAATGGTGCGTCGAGAGATCGGCCAGATTCTCCAAGCCTATGGCAACGAGCCGTTAAGCTTAACGGTCATTGGCCATAGCCTTGGAGCAGCGCTAGCCGCTCTCACAGCGTACGATATTAACGCTGCCTTTGCCCGGTTGCCAATAACAACTACCGTCGTATCTTTTGGCTGTCCACGTGTCGGCAACCGACACTTCAGGCAGCGTTTGGAGGGACAAGGGACGAAAGTCTTACGTATAGTGAACTCGGACGATGTTGTTACAAAAGTGCCAGGGTTTGTGTTCCATGATGATGATGATGGCCACGTGGAAGGTGTAAAAAGGTGGATGAAGAAGATGATGATTGAAAAAGAAGAGTGGGTGTACACTGAGGTTGGGGAGGAGCTTCGCCTTTGTAGTAGGGATTCGCCCTACCTTAGTGGCAGCATCGATGCTGCCACGTGTCATGAGTTGAAAACCTATCTCCATCTTGTTGATGGCTTTGTTAGCTCCAAATGTCCCTTTAAAGCCACTACAAAGAGGTTTCTCTAA 1329 0.4507 MKLTPMKPLYPTSPTINIVKPRCITIINQPSKAHNPHNIGKSVEKTIYNNLENHNLSTTSLSPSNNKVGNRWMEYQGVNNWEGLLDPLDNNLRAEILRYGQFVEAAYKSFEFDPSSPSYGSCKFPTKTTLLEKCGFPNTGYNVTKFLHATSGIQLPRWLLNKAPTPTWVSTQSSYIGYVAVCDNKEEIKRLGRRDIVVAYRGTATCLEWLQNLRATLTHLPIMPCKRSWRHFHKEYQITTPMVESGFLSLYTSSPCNSENSVTSLQQMVRREIGQILQAYGNEPLSLTVIGHSLGAALAALTAYDINAAFARLPITTTVVSFGCPRVGNRHFRQRLEGQGTKVLRIVNSDDVVTKVPGFVFHDDDDGHVEGVKRWMKKMMIEKEEWVYTEVGEELRLCSRDSPYLSGSIDAATCHELKTYLHLVDGFVSSKCPFKATTKRFL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1760 442 Pfam Lipase (class 3) 197 359 IPR002921 GO:0006629
Aed2g1760 442 PANTHER PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC 45 441 - -
Aed2g1760 442 Gene3D alpha/beta hydrolase 71 442 IPR029058 -
Aed2g1760 442 SUPERFAMILY alpha/beta-Hydrolases 166 392 IPR029058 -
Aed2g1760 442 CDD Lipase_3 127 368 - -
Aed2g1760 442 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 45 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1760 Aed-Chr2 22305743 22307071 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1760 1 442 Acyl Lipid Metabolism Gene Families AT2G44810 55.603 2.53e-171 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1760 K16818 - gmx:100816744 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1760 2 22305743 22307071 Aed2g1760 2 22305743 22307071 ECH
Aed2g1760 2 22305743 22307071 Aed3g0458 3 3250641 3251978 PCT