Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2648 ATGCTAGAGAAAGTGGAGGAGTTAAACATGGATAAAGTTATAGAAGAGTTTGAGTTATTGACAAGGGATGCAGAAAGGGTTCAGAGGGAAACACTGAAGAGGATTTTGGAGGATAACGCATCAGCAGAGTATTTGCTGAGTTTGGGTCTCAATGGAAGAACTGACCCAGAGAGTTTCAAGGCCTGTGTTCCACTGGCCACCCACAAAGAATTGGAACCATATATCTACAGAATTATTGATGGTGATACTTCTCCTATTCTCACTGGAAAACCCATCACAACCATGTCTTTAAGTTCTGGCACTACCCAGGGGAAGCCAAAATATGTACCTTGGAATGATGAATTGTATGAAACCACAATGCAGATATACCAGACCTCTTTTGCCTTTAGAAACAGGGAGTTTCCTATAAAAAATGGGAAGGCTTTAAGCTTCATATACGGTAGCAAACAGTTCAAAACAAAGGGGGGTTTGGCAGCTAGAACTGCCACAAGCAATGTGTTTGGTAATGCTGGTTACAAGTGTGCAATGAGGGCACTCCACTCCCAATGCTGCAGCCCAGATGAAGTGATATTTGGTCCTGATTTTTTCCAATCATTGTACTGCCATCTGTTGTGTGGTCTGATTTTCCGGGAGGAAGTTCAGTTTGTGTCTTCCACATTTGCACATAGCATTGTCCATGCTTTTAGAACCTTTGAACAAGTTTGGGAAGAGCTGTGCAACGATATCAGAGAAGGGGATCTCACCAGAAATGTCACTGTTCCTTCCATTCGAATGGCGATGTCTAAACTGCTCAAACCAAACCCTGAATTAGCTAACGTGATCCACAAAAAATGCACGGGGTTGAGCAACTGGTACGGGTTGATACCGGAGCTTTTTCCCAATGTAAAGTATATTTATGGCATCATGACTGGGTCAATGGAGCCTTATTTGAAAAAGTTGAGGCATTATGCTGGGGAGCTGCCTTTGTTGACTTCTGACTATGGTTCTTCTGAGGGATGGATAGCAGCAAATGTGAACCCACAACTTCCTCCTGAGTATGCCACTTACGCTGTGCTTCCTCACATTGGTTACTTTGAATTTATTCTTCTCTCAGAGCTTGAGAACACCAAGCCTGTGGGCCTGACTGAAGTCAAGGTTGGTGAAGAGTATGAAATTGTTATGACAAATCCAGCAGGTTTATACCGGTATAGATTGGGGGATGTGGTGAAGGTTATGGGATTCCACAATTCAACTCCAGAACTGAAGTTTATTCGAAGGAGCAGTCTTCTGCTGAACATTAACATTGACAAGAACACTGAGAAGGATTTACAGTTAGCTGTTGAAGCTGCAGCAAAGTTGTTACAAGAGGAGAAAGTGGAAGTAGTTGACTTCAGTAGCCATGTTGATTTATCGAAAGAACCAGGGCACTATGTGATATTCTGGGAAATCAGTGGAGAAACAGCAGGTGAAGAACTACTCCATGAATGCTGA 1470 0.4286 MLEKVEELNMDKVIEEFELLTRDAERVQRETLKRILEDNASAEYLLSLGLNGRTDPESFKACVPLATHKELEPYIYRIIDGDTSPILTGKPITTMSLSSGTTQGKPKYVPWNDELYETTMQIYQTSFAFRNREFPIKNGKALSFIYGSKQFKTKGGLAARTATSNVFGNAGYKCAMRALHSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVQFVSSTFAHSIVHAFRTFEQVWEELCNDIREGDLTRNVTVPSIRMAMSKLLKPNPELANVIHKKCTGLSNWYGLIPELFPNVKYIYGIMTGSMEPYLKKLRHYAGELPLLTSDYGSSEGWIAANVNPQLPPEYATYAVLPHIGYFEFILLSELENTKPVGLTEVKVGEEYEIVMTNPAGLYRYRLGDVVKVMGFHNSTPELKFIRRSSLLLNINIDKNTEKDLQLAVEAAAKLLQEEKVEVVDFSSHVDLSKEPGHYVIFWEISGETAGEELLHEC 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2648 489 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 489 - -
Aed2g2648 489 Coils Coil 10 30 - -
Aed2g2648 489 Pfam GH3 auxin-responsive promoter 16 479 IPR004993 -
Aed2g2648 489 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 489 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2648 Aed-Chr2 28675529 28680680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2648 12 479 EF-hand Containing Proteins AT1G23160 39.490 2.44e-112 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2648 K14506 - gmx:100777944 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2648 2 28675529 28680680 Aed2g0571 2 4138733 4143528 PCT