Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0571 ATGTTGGAGAAAGTGGAAGAATTCCAGATGGAGAGGGTGATAGAGGAATTTGAGAGGGTTACAAAGGATGCTGAGAGGATTCAAAGGGAAACCCTGAAGAGGATTTTGGAAGATAACGCTTCTGCTGAGTACTTGCTGAGTTTGGGTCTGAATGGGAGGACTGATGCTGAAAGTTTCAAGGCCTTTGTTCCACTGGTTACTCACAAAGATTTGGAGCCTTATATCAATAGAATACTTGATGGTGATTTTTCTTCTGTTCTCACTGGCAAACCCATCACAACCATGTCTTTGAGCAGCAAGCAGTTCAAAACAAAAGGGGGTGTGCTAGCAGGAACTGCCACAACCTACGTGTTCCGAAACCCGGGGTACCGGAACACAATGAAGGCATTTCAGTCCCCACTTTGCAGCCCTGAGGAAGTCATATTTGGTGCTGATTTTCACCAATCACTCTACTGCCACCTCTTGTGTGGCCTAATCTTCAGGGAAGAAGTCAAGTTGGTGTCTTCAACATTTGCACACAGCATTGTCTATGCTTTTAGGACCTTTGAACAAGTTTGGGAGGAGCTTTGTGTTGATATCAAGGAAGGTGTCCTTAACAGCAAGGTCACAGTTCCTTCCGTTAGGACAGCTATGTCTAAAATCCTCAAACCTGACCCTGAACTTGCCAACTTGATCCACAACAAGTGCATTGGACTCAGCAACTGGTATGGCCTAATACCAGAGCTTTTCCCCAATGCGAAGTATGTTTATGGGATCATGACAGGGTCAATGGAACCTTATTTGAAAAAGTTGAGGCATTATGCTGGAGAGTTGCCTTTGTTGACCTCTGACTATGGATCTTCTGAAGGGTGGATTGGAACAAATGTGAAACCAGAAGTCCCACCTGAACTGGCCACCTACACTGTGCTTCCTCAAATTGGCTACTTTGAATTCATCCCTCTCAGAGAGCTTGAGGGAACTAAGGGAGATGCTACTTTCCTTTGTATGGATCCTAAGCCTGTGGGCCTCACTGAGGTCAAAGTTGGTGAAGAGTATGAGATTGTCATCACCAATCCTGCAGGCTTGTACCGGTACCGGCTAGGCGATGTTGTTAAGGTTACGGGGTTCCATAACTCATCTCCAGAAATCAAGTTTGTTCGTCGCAGCAATCTTCTGCTGACAATCAACATAGACAAGAACACAGAGAAAGATCTGCAGCTAGCAGTGGAAACAGCATCACAGTTGTTGGCAGAGGAGAAACTGGAAGTTGTGGACTACACTAGCAACATAGATATGTCCAAAGAGCCAGGACACTATGTGATATTCTGGGAAATAAGTGGTGAAGCAAGTGAAGAAATGCTTGGTGGATGCTGCAACATTTTGGACAAGTCTTTTGTTGATGCTGGCTACACCAGTTCTAGAAAAGTCAACTGCATTGGGGCCCTCGAGCTCCGAGTTGTGAGGAGAGGAACATTCCAGAAGATTCTTGATCATTTCCTTGCACTAGGAGCTGGTGTGAGTCAGTTCAAGACACCAAGATGTGTAGGCCCTACTAACACCAAAGTGTTGCAAATATTGAATGAAAATGTTGTCAAGAGCTATCTCAGTACTGCTTTCAATTGA 1602 0.4494 MLEKVEEFQMERVIEEFERVTKDAERIQRETLKRILEDNASAEYLLSLGLNGRTDAESFKAFVPLVTHKDLEPYINRILDGDFSSVLTGKPITTMSLSSKQFKTKGGVLAGTATTYVFRNPGYRNTMKAFQSPLCSPEEVIFGADFHQSLYCHLLCGLIFREEVKLVSSTFAHSIVYAFRTFEQVWEELCVDIKEGVLNSKVTVPSVRTAMSKILKPDPELANLIHNKCIGLSNWYGLIPELFPNAKYVYGIMTGSMEPYLKKLRHYAGELPLLTSDYGSSEGWIGTNVKPEVPPELATYTVLPQIGYFEFIPLRELEGTKGDATFLCMDPKPVGLTEVKVGEEYEIVITNPAGLYRYRLGDVVKVTGFHNSSPEIKFVRRSNLLLTINIDKNTEKDLQLAVETASQLLAEEKLEVVDYTSNIDMSKEPGHYVIFWEISGEASEEMLGGCCNILDKSFVDAGYTSSRKVNCIGALELRVVRRGTFQKILDHFLALGAGVSQFKTPRCVGPTNTKVLQILNENVVKSYLSTAFN 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0571 533 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 99 533 IPR004993 -
Aed2g0571 533 Coils Coil 10 30 - -
Aed2g0571 533 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 99 - -
Aed2g0571 533 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 99 533 - -
Aed2g0571 533 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 99 IPR004993 -
Aed2g0571 533 Pfam GH3 auxin-responsive promoter 98 508 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0571 Aed-Chr2 4138733 4143528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0571 17 530 EF-hand Containing Proteins AT1G23160 37.024 8.16e-120 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0571 K14506 - gmx:100813492 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0571 2 4138733 4143528 Aed2g0571 2 4138733 4143528 ECH
Aed2g2648 2 28675529 28680680 Aed2g0571 2 4138733 4143528 PCT