Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2391 ATGTTGCAGTGCATATTTCTTCTGTCGGATTCCGGAGAGGTAATGCTAGAGAAACAGCTTTGTGGGCACCGCGTAGATCGCTCCATATGCGCCTGGTTCTGGGACCAAGCCAATTCTCAACCTGATTCATTCAAGCAACAGCCAGTAATTGCATCTCCCACGCATTATCTTTTCCAAGTTTTTCGTGAGGGAATCACCTTTTTGGCCTGCACTCAAGTCGAAATGCCACCATTGATGGCCATTGAGCTGCTGGATGAGATGATAGACAATGGCTTCCCACTAACTACGGAACCTAATATCCTGCAAGAGATGATAGCTCCACCGAATATTGTTAGCAAGGTCTTGAGTGTTGTGACTGGAAGCAGCTCCAATGTGAGTGATACCCTTCCAGGTGCTACTGCATCTCTTGTTCCCTGGAGAACAGCAGACACAAAGTATGCCAACAATGAAATTTATGTAGATCTTGTTGAAGAAATGGATGCAACAATAAACAGGGATGGAGTTCTGGTGAAATGTGAGATCAATGGTGAGGTTCAAGTGAATTCCCATATCACAGGTCTTCCTGACTTAACTCTTTCATTTGCAAATCCATCAATCCTTGATGATGTGAGGTTCCATCCCTGTGTTAGATATCGACCCTGGGAATCTGATCAAATTCTTTCATTCGTGCCTCCTGATGGACAATTTAAGCTTATGAGTTACAGAATTGGAAAATTAAAGAACACCCCGATATATGTAAAGCCACAATTGACTTCAGATGGTGGAACATGCCGTGTTAGTGTATTGGTTGGCATAAGAAATGATCCTGGAAAGACAATTGATAACGTTACTGTGCAGTTTCAACTTCCTTCTTGCATCTTATCAGCTGATCTGGCTTCAAATTATGGAATAGTAAACATCCTTGCTAACAAGACATGCTGTTGGTCAATTGGTCGGATCCCAAAGGATAAAGCCCCTTCAATGTCGGGAACATTGGTTCTGGAGACTGGATTGGAGCGCCTTCATGTCTTTCCCACATTTCAAGTGGGTTTTAGGATTATGGGTGTTGCCCTTTCTGGTCTGAAAATAGATAAACTAGATCTCAAGACTGTACCTTACCGTTTTTATAAAGGTTTTCGAGCTCTTACTCGGGCAGGGGAATTTGAAGTCAGGTCATAA 1158 0.4292 MLQCIFLLSDSGEVMLEKQLCGHRVDRSICAWFWDQANSQPDSFKQQPVIASPTHYLFQVFREGITFLACTQVEMPPLMAIELLDEMIDNGFPLTTEPNILQEMIAPPNIVSKVLSVVTGSSSNVSDTLPGATASLVPWRTADTKYANNEIYVDLVEEMDATINRDGVLVKCEINGEVQVNSHITGLPDLTLSFANPSILDDVRFHPCVRYRPWESDQILSFVPPDGQFKLMSYRIGKLKNTPIYVKPQLTSDGGTCRVSVLVGIRNDPGKTIDNVTVQFQLPSCILSADLASNYGIVNILANKTCCWSIGRIPKDKAPSMSGTLVLETGLERLHVFPTFQVGFRIMGVALSGLKIDKLDLKTVPYRFYKGFRALTRAGEFEVRS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2391 385 PANTHER AP COMPLEX SUBUNIT MU 7 384 - -
Aed2g2391 385 ProSitePatterns Clathrin adaptor complexes medium chain signature 1. 137 157 IPR018240 GO:0006886|GO:0016192|GO:0030131
Aed2g2391 385 ProSiteProfiles Mu homology domain (MHD) profile. 148 384 IPR028565 -
Aed2g2391 385 SUPERFAMILY Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 137 384 IPR036168 -
Aed2g2391 385 CDD AP-3_Mu3_Cterm 137 384 - -
Aed2g2391 385 PANTHER CARMINE, ISOFORM A 7 384 - -
Aed2g2391 385 Gene3D Mu homology domain, subdomain B 242 383 - -
Aed2g2391 385 Pfam Adaptor complexes medium subunit family 137 384 IPR028565 -
Aed2g2391 385 CDD AP3_Mu_N 3 112 - -
Aed2g2391 385 PRINTS Clathrin coat assembly protein signature 200 227 IPR001392 GO:0006886|GO:0016192|GO:0030131
Aed2g2391 385 PRINTS Clathrin coat assembly protein signature 70 97 IPR001392 GO:0006886|GO:0016192|GO:0030131
Aed2g2391 385 PRINTS Clathrin coat assembly protein signature 307 318 IPR001392 GO:0006886|GO:0016192|GO:0030131
Aed2g2391 385 PIRSF AP_complex_mu 78 385 IPR001392 GO:0006886|GO:0016192|GO:0030131
Aed2g2391 385 PIRSF AP_complex_mu 1 84 IPR001392 GO:0006886|GO:0016192|GO:0030131
Aed2g2391 385 Gene3D Mu homology domain, subdomain B 137 380 - -
Aed2g2391 385 SUPERFAMILY SNARE-like 1 112 IPR011012 -
Aed2g2391 385 Gene3D - 82 112 - -
Aed2g2391 385 Gene3D - 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2391 Aed-Chr2 27042286 27045542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2391 K12398 - gmx:100791605 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2391 2 27042286 27045542 Aed8g1625 8 21326673 21329161 PCT