Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2380 ATGGGGACTGAAAATCCTGGTCGTCCTACCTTCCCTCCTTCAAGACCTTTTGCCGCTGCTGCACAGACAGTGACACCTTTTTCATCAACCGGTCCCGTGGCTGGATCAGAGCCCCTATCTTTTCAGCCTAGTCCTCCAGCTCCGTTTGGGGCACCCAGTTTTAGACCTGCACCACCAGGGAGGTTCAATGATCCATCAGTACCGCAGCAGCAACCATCCAATGCCCCACCGCCTCCTGGATCTTTTCAGCAATTTCCGGCACCGCCCTACCCCCCATCAATGCAGCCACGTGCTCCTCCGCTGTCAATGGGACCGCCATCAATTCATACTCCACCTTTTCCAACGTCTCTTCCAGCCCAGCCACAGATGCCTTCTGTTCCAATGGGCTCTCCCCCACTACAAAATGCTGCTCCTTCACATTTAGGCTCAAATGTTCCTCCAATGCCTACATTTCAGCCATCTTTTCCTGGGTACCCGAGTAAGCAGCCCAGTCCTGAAATCCAAGGCCCACCTATGCATTCCTCGTTCCCTGCTAATCAAGGAAAATTTGGGCCTGTCCCACCTGCTGTGTCTTCTCCTTTTTTGTCTAATCAAGGAAGCTATCCTCCATCGCCCCCGGTAGGTATCCAGCCAATGCAGCAGCCAGGATCTTTGCCCCCAATGGGTGGCGTTCAGGGCTTGGCAGAGGACTTCCACGCGCTCACATTGCAAACTCGTCCTGGAACAATGGATCCGTTATTTGATGCCAAGGAACTTCCAAGGCCATTGGAAGGTGATGTTGAACCAAAGAATTTGGTTGAGATGTATCCCATGAACTGCAATCCCCGGTATCTACGACTCACAACCAGTGCAGTTCCAAGCTCCCAGTCCTTGGCTTCAAGGTGGCATCTTCCTCTTGGAGCAGTTGTGTGCCCACTTGCTGAACCTCCTGATGGGGAAGAGGTGCCTATAGTTAATTTTGCTCCAGCTAGTGTTGTCCGCTGCAGAAGATGTCGCACATATGTGAACCCTTATATGACATTTACTGAAGCTGGAAGAAAGTTCCGCTGCAACGTCTGTACCTTGCTTAATGATGTTCCTACTGAGTATTATGCTCAATTAGATGCAACTGGAAAAAGGGTTGATATAAATCAACGACCCGAGCTTACAAAGGGGACTGTAGAATTTGTTGCCCCTGCTGAGTACATGGTGCGGCCTCCTATGCCACCAGTGTATTTCTTCCTCATCGATGTTTCTATTTCTGCTGTTAGAAGTGGCATGATTGAGGTTGTGGCCAATACAATCAAGTCATGCTTAGATGAGCTGCCTGGCTTTCCACGTACGCAAATAGGGTTTGCAACTTTTGACAGCACAATACATTTTTATAACATGAAGTCTTCCTTGACTCAACCACAGATGCTGGTAGTGTCAGATCTGGATGATATATTTATTCCACTGCCAGATGATCTTCTTGTTAACTTGTCTGAATCAAGAAGTGTGGTAGAAACCTTCCTAGATAGTTTGCCAACCATGTTCCAGGACAATGTTAACTTGGAATCAGCTTTTGGTCCTGCTCTTAAGGCCGCGTTTATGGTTATGAGTCAACTTGGAGGGAAATTGTTAATATTTCAAAACACACTCCCATCTCTTGGTGTTGGCCGCTTAAAGTTACGTGGAGATGATTCTCGTGTTTATGGGACAGACAAAGAACATGGAATGAGACTGCCCGAAGATCCATTCTATAAACAAATGGCTGCTGAGTTTTCCAAGTACCAAATCTCAACGAATGTGTATGCATTCAGTGATAAGTACACCGACATAGCCTCCTTAGGAACTCTGGCAAAGTATACTGCTGGTCAAGTGTATTACTATCCAGCTTTCCAATCAGCCATTCATGGGGAGAAATTGAGACATGAATTGAGACGAGACCTTATCAGAGAAACTGCATGGGAAGCTGTAATGCGCATTAGATGTGCAAAAGGTGTTCGCTTCACAACTTATCATGGAAACTTCATGCTGAGGTCCACCGATTTGTTAGCACTTCCTGCTGTAGATTCTGATAAAGCCTTTGCCATGCAGTTATCTCTTGAAGAGACATTGTTGACAACTCAGACAATGTATTTCCAAGTTGCATTGCTATATACTGCATCTTGTGGTGAAAGGCGAATAAGAGTACACACAATGGCAGTTCCAGTGGTCACAGAGTTAGCAGATATCTATCGCCTGGCTGATACTGGGGCAATTGTATCACTGTTAAGTAGGCTGGCAATTGAGAAAACATTGTCCCAAAAACTGGAAGATGCACGGAGTTCTGTTCAACAAAGAATTGTGAAAGCCCTCAGGGAATATCGAAATCTTTATGCTGTGCAACATCGCTTGGCCAACAGAATGATATATCCTGAATCTTTAAAGTTCTTAATGTTGTATGGATCAGCCATTTGTAGATCAACAGCTTTACGTGGAGGGTATGGCGATGTTCCACTGGATGAACGATGTGTAGCAGGACACATAATGATGACTGTATCAATAAAAAGACTGTTGAAACTTCTCTATCCTAGCTTGATTCGACTTGATGAATATCTTCTGAAGGCTTCTGTACAGGCTGATGACTTAAAAAGTGTTGAGAGAAGATTACCTTTGACTGGGGAGAGCTTAGACTCTAGAGGCCTTTATATTTATGATGATGGCTTCCGGTTCATTGTGTGGTTTGGTAGAGTGATTTCACCTGATATAGCCAAGAATTTACTTGGGGCAGACTTTGCAGCAGAATTATCAAAGACTACTCTCAGTGAGCATGATAATGAAATGTCAAAGAGGCTGGTGAAAGTACTTGAGAAGTTGAGAAATACAGATCGTGCATATTACCAGTTGTGCCACCTTGTGAGGCAAGGTGAACAGCCCAAAGAAGGATTCCTCCTTCTTGCAAACCTTGTTGAGGACCAGATGGGTGGTAACAGTGGGTATGCTGAATGGATGCTGCAGATATCCCGACAAGTGCAGCAATAG 2985 0.4559 MGTENPGRPTFPPSRPFAAAAQTVTPFSSTGPVAGSEPLSFQPSPPAPFGAPSFRPAPPGRFNDPSVPQQQPSNAPPPPGSFQQFPAPPYPPSMQPRAPPLSMGPPSIHTPPFPTSLPAQPQMPSVPMGSPPLQNAAPSHLGSNVPPMPTFQPSFPGYPSKQPSPEIQGPPMHSSFPANQGKFGPVPPAVSSPFLSNQGSYPPSPPVGIQPMQQPGSLPPMGGVQGLAEDFHALTLQTRPGTMDPLFDAKELPRPLEGDVEPKNLVEMYPMNCNPRYLRLTTSAVPSSQSLASRWHLPLGAVVCPLAEPPDGEEVPIVNFAPASVVRCRRCRTYVNPYMTFTEAGRKFRCNVCTLLNDVPTEYYAQLDATGKRVDINQRPELTKGTVEFVAPAEYMVRPPMPPVYFFLIDVSISAVRSGMIEVVANTIKSCLDELPGFPRTQIGFATFDSTIHFYNMKSSLTQPQMLVVSDLDDIFIPLPDDLLVNLSESRSVVETFLDSLPTMFQDNVNLESAFGPALKAAFMVMSQLGGKLLIFQNTLPSLGVGRLKLRGDDSRVYGTDKEHGMRLPEDPFYKQMAAEFSKYQISTNVYAFSDKYTDIASLGTLAKYTAGQVYYYPAFQSAIHGEKLRHELRRDLIRETAWEAVMRIRCAKGVRFTTYHGNFMLRSTDLLALPAVDSDKAFAMQLSLEETLLTTQTMYFQVALLYTASCGERRIRVHTMAVPVVTELADIYRLADTGAIVSLLSRLAIEKTLSQKLEDARSSVQQRIVKALREYRNLYAVQHRLANRMIYPESLKFLMLYGSAICRSTALRGGYGDVPLDERCVAGHIMMTVSIKRLLKLLYPSLIRLDEYLLKASVQADDLKSVERRLPLTGESLDSRGLYIYDDGFRFIVWFGRVISPDIAKNLLGADFAAELSKTTLSEHDNEMSKRLVKVLEKLRNTDRAYYQLCHLVRQGEQPKEGFLLLANLVEDQMGGNSGYAEWMLQISRQVQQ 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2380 994 PANTHER SEC24-RELATED PROTEIN 26 994 - -
Aed2g2380 994 Pfam Sec23/Sec24 beta-sandwich domain 642 726 IPR012990 -
Aed2g2380 994 Pfam Sec23/Sec24 zinc finger 326 363 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Aed2g2380 994 Gene3D Severin 845 973 IPR029006 -
Aed2g2380 994 Pfam Sec23/Sec24 helical domain 737 840 IPR006900 GO:0006886|GO:0006888|GO:0030127
Aed2g2380 994 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 854 994 IPR036180 -
Aed2g2380 994 MobiDBLite consensus disorder prediction 39 128 - -
Aed2g2380 994 SUPERFAMILY beta-sandwich domain of Sec23/24 86 735 - -
Aed2g2380 994 Gene3D Sec23/Sec24 helical domain 726 992 - -
Aed2g2380 994 Coils Coil 755 775 - -
Aed2g2380 994 Gene3D von Willebrand factor, type A domain 402 639 IPR036465 -
Aed2g2380 994 PANTHER OS04G0129500 PROTEIN 26 994 - -
Aed2g2380 994 SUPERFAMILY vWA-like 400 628 IPR036465 -
Aed2g2380 994 Pfam Sec23/Sec24 trunk domain 400 636 IPR006896 GO:0006886|GO:0006888|GO:0030127
Aed2g2380 994 Gene3D - 273 725 - -
Aed2g2380 994 Pfam Gelsolin repeat 872 928 IPR007123 -
Aed2g2380 994 SUPERFAMILY Zn-finger domain of Sec23/24 316 399 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Aed2g2380 994 MobiDBLite consensus disorder prediction 21 37 - -
Aed2g2380 994 MobiDBLite consensus disorder prediction 1 145 - -
Aed2g2380 994 Gene3D - 272 384 - -
Aed2g2380 994 CDD Sec24-like 400 641 IPR041742 GO:0006886|GO:0006888|GO:0030127
Aed2g2380 994 SUPERFAMILY Helical domain of Sec23/24 737 844 IPR036175 GO:0006886|GO:0006888|GO:0030127
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2380 Aed-Chr2 26967952 26977497 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2380 K14007 - gmx:100791083 1798.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2380 2 26967952 26977497 Aed8g1617 8 21273537 21283657 PCT