Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1755 ATGAATCCCGATGACTATCTGTTCAAGCTCCTTCTAATTGGAGACTCTGGTGTTGGTAAATCGTGCCTTCTTCTAAGATTTGCTGATGATTCATACATTGAGAGCTACATAAGCACCATTGGAGTTGATTTTAAAATTCGCACTGTTGAGCAGGATGGGAAGACAATTAAACTTCAGATTTGGGATACTGCTGGGCAAGAACGATTTAGGACAATAACTAGTAGCTACTATCGTGGAGCACATGGAATCATTATTGTTTATGACGTGACAGATGAAGACAGCTTCAATAATGTGAAGCAATGGCTCAGTGAAATTGACCGCTATGCCAGTGATAATGTTAACAAACTTTTGGTTGGAAACAAGAGTGATCTGACAGCAAACAGAGTTGTCTCATATGACACAGCTAAAGAATTCGCAGATCAAATTGGCATACCTTTCATGGAAACAAGTGCAAAAGATGCTACAAATGTTGAAGATGCATTCATGGCCATGTCTGCTTCCATCAAGAATAGATTAGAGGGCAACCTGTTGGGCAAAAAGGTGGTTGCTGCTCTTCCTAACCAGATGGTGTTGCTTGGTCTACACTTACCTTCTGCATGTAAGGGGTATATGCTACTTCACTAA 624 0.4054 MNPDDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEDSFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTANRVVSYDTAKEFADQIGIPFMETSAKDATNVEDAFMAMSASIKNRLEGNLLGKKVVAALPNQMVLLGLHLPSACKGYMLLH 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1755 207 SMART rho_sub_3 10 170 IPR001806 GO:0003924|GO:0005525
Aed2g1755 207 PANTHER LD21953P-RELATED 4 171 - -
Aed2g1755 207 PANTHER RAS-RELATED PROTEIN RABD2A-LIKE 4 171 - -
Aed2g1755 207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 173 IPR027417 -
Aed2g1755 207 PRINTS Transforming protein P21 ras signature 111 124 - -
Aed2g1755 207 PRINTS Transforming protein P21 ras signature 8 29 - -
Aed2g1755 207 PRINTS Transforming protein P21 ras signature 31 47 - -
Aed2g1755 207 PRINTS Transforming protein P21 ras signature 49 71 - -
Aed2g1755 207 PRINTS Transforming protein P21 ras signature 146 168 - -
Aed2g1755 207 ProSiteProfiles small GTPase Ras family profile. 1 206 IPR001806 GO:0003924|GO:0005525
Aed2g1755 207 SMART ran_sub_2 13 204 - -
Aed2g1755 207 ProSiteProfiles small GTPase Arf family profile. 1 194 - -
Aed2g1755 207 TIGRFAM small_GTP: small GTP-binding protein domain 6 163 IPR005225 GO:0005525
Aed2g1755 207 SMART arf_sub_2 2 172 - -
Aed2g1755 207 ProSiteProfiles small GTPase Rho family profile. 1 174 - -
Aed2g1755 207 SMART rab_sub_5 8 171 - -
Aed2g1755 207 Pfam Ras family 9 168 IPR001806 GO:0003924|GO:0005525
Aed2g1755 207 Gene3D - 1 184 IPR027417 -
Aed2g1755 207 CDD Rab1_Ypt1 6 171 - -
Aed2g1755 207 SMART ras_sub_4 5 171 - -
Aed2g1755 207 ProSiteProfiles small GTPase Rab1 family profile. 3 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1755 Aed-Chr2 22244600 22248128 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1755 K07874 - gmx:100306147 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1755 2 22244600 22248128 Aed2g1755 2 22244600 22248128 ECH
Aed2g1755 2 22244600 22248128 Aed3g0461 3 3291481 3295015 PCT