Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0826 ATGGGTTTGTTTTCTGGGATTTTCATGGGGGTGTTGTTCGGCATCGCATTGATGGCTGGATGGGCACGCATGATGAGGTACCGAAGTGCCAAGCGAATTACAAAGGCAGCTGACATTAAACTCCTTGGATCCCTTAACAGAGATGATTTAAAGAAAATTTGTGGTGAAAATTTGCCTGAGTGGATATCTTTTCCTGTATATGAACAGGTGAAATGGCTGAACAAGTTTTTAACCAAACTCTGGCCATTTGTGGCAGAAGCAGCAACTTTAGTGATCAGAGAATCTGTTGAACCACTGCTAGAAGAGTACAGGCCTCCTGGAATTACTTCATTGAAGTTCAGCAAGCTGTCACTTGGAAATGTGGCTCCAAAAATTGAAGGTATTCGTGTTCAGAGCTTAACCAAAGGTCAAATCATAATGGATGTTGATTTCCGTTGGGGTGGTGATCCTAGTATTATTTTGGCTGTTGAAGCTGCACTTTTGAAGGATCTACAGGTTTTCACCATTGTCCGTGTGATATTCCAACTTGCTGAAGAGATCCCTTGCATTTCTGCTGTTGTTGTAGCTCTGCTTGCTGAGCCAAAGCCCAGGATTGATTATACTCTGAAAGCTGTCGGTGGAAGTTTAACTGCTATTCCTGGAATTTCAGATATGATTGATGATACTGTGAACTCAATTGTTACTGACATGCTCCAGTGGCCTCATAGGATTGTGGTTCCACTTGGTGGTATTCCTGTTGATACCAGTGAACTGGAGCTTAAACCCCAGGGAAAACTTACACTGACTGTGGTGAAAGCGACTGCTTTAAAGAATATGGAAATGATTGGAAAGTCAGATCCTTATGTAGTCGTGCATATTCGACCATTATTTAAGTATAAAACCAAGGTTGTTGATAACAACTTGAATCCTACTTGGAATGAAACATTTGAGTTGATTGCAGAAGACAAGGAGACCCAATCACTAATTCTTGAGGTTCTCGATAAAGACATTGGACAAGATAAGCGATTGGGAATAGCACAGTTACCCCTTATTGATCTAGAAATACAAAATGAAAAGGAGATCGAAATGAGGCTGCTGCCATCACTTGATACACTGAAGGTGAAAGATAAGAAGGATCGAGGAACCTTAACAGTAAAGGTCAAGTATTATCAGTTTAACAAGGAAGAGCAGTTGGCTGCCCTAGAAGCAGAAAAAGAGATACTAGAACAAAGGAAGAGACTGAAAGAAGCGGGAATGATAGGAAGCACAATGGATGCACTAGACGGAGCGGTATCAGTGGTAGGGTCTGGCGTTGGACTGGTTGGTACCGGTGTTGTTGCCGGTGCCGGGCTTGTGGGAAGTGGCATCGGTGCTGGAGCCGGGCTTGTTGGAAGCGGCATTGGTGCTGGAGTCGGCATTGTCGGGAGTGGTTTTGGAGCCGTTGGTAGCGGACTCAGCAAGGCAGGGAAGTTCATGGGAAGGACAATCACAGGTCATAGTGGCTCCAGAAAGAGTGGTTCTTCGACTCCGGTCAGTAATGCACAGGAGAATGGTGGTGGTGCAAAGCCTCTTTGA 1554 0.4427 MGLFSGIFMGVLFGIALMAGWARMMRYRSAKRITKAADIKLLGSLNRDDLKKICGENLPEWISFPVYEQVKWLNKFLTKLWPFVAEAATLVIRESVEPLLEEYRPPGITSLKFSKLSLGNVAPKIEGIRVQSLTKGQIIMDVDFRWGGDPSIILAVEAALLKDLQVFTIVRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTAIPGISDMIDDTVNSIVTDMLQWPHRIVVPLGGIPVDTSELELKPQGKLTLTVVKATALKNMEMIGKSDPYVVVHIRPLFKYKTKVVDNNLNPTWNETFELIAEDKETQSLILEVLDKDIGQDKRLGIAQLPLIDLEIQNEKEIEMRLLPSLDTLKVKDKKDRGTLTVKVKYYQFNKEEQLAALEAEKEILEQRKRLKEAGMIGSTMDALDGAVSVVGSGVGLVGTGVVAGAGLVGSGIGAGAGLVGSGIGAGVGIVGSGFGAVGSGLSKAGKFMGRTITGHSGSRKSGSSTPVSNAQENGGGAKPL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0826 517 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 241 IPR039010 -
Aed2g0826 517 PRINTS C2 domain signature 299 312 IPR000008 -
Aed2g0826 517 PRINTS C2 domain signature 321 329 IPR000008 -
Aed2g0826 517 PRINTS C2 domain signature 274 286 IPR000008 -
Aed2g0826 517 MobiDBLite consensus disorder prediction 487 517 - -
Aed2g0826 517 MobiDBLite consensus disorder prediction 491 509 - -
Aed2g0826 517 Pfam C2 domain 257 353 IPR000008 -
Aed2g0826 517 Gene3D C2 domain 252 411 IPR035892 -
Aed2g0826 517 ProSiteProfiles C2 domain profile. 240 358 IPR000008 -
Aed2g0826 517 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 512 IPR045050 GO:0008289
Aed2g0826 517 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 255 385 IPR035892 -
Aed2g0826 517 CDD C2 259 353 - -
Aed2g0826 517 Coils Coil 384 411 - -
Aed2g0826 517 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 242 IPR031468 GO:0008289
Aed2g0826 517 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 512 - -
Aed2g0826 517 SMART C2_3c 258 355 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0826 Aed-Chr2 6369182 6377229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0826 242 343 Lipid Metabolism Gene Families AT3G61300 33.010 7.14e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0826 - - gmx:100777838 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0792 3 5603376 5612954 Aed2g0826 2 6369182 6377229 PCT