Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0541 ATGTCGTCTGCTGGTGTTACCATTCTTAGCCCCGTTCCAAGGGAGCTACTGTTGTCCCCAAATGGATACTATACCCCATGGCACTTGTCATTGGTTCCTGATTTTTTCATATATCTGTCCCATTCTGGATCTTTGACTCCAATGCGAGTTCTTCCCTGCGATACCATTGAGTCTGTGAAACTCAAAATCCAGAAGTCTGAGGGGCTTCCTTCATTGACAAACAAACAAAAGTTGGTTTGTGATGGCCGGGAGCTAGCACGGAGCAATTCCCTGCTGAAGGACTATGGGGTTACCGAAGGAAATGTTTTGCATTTGGTGATTCGGCTGTCGGATCTCCAGACTATCAGTGTCAGAACTTCTTCCGGGAAGGAGTTTACTTTTCAGGTGGAGAGGTCCAGAGATGTTGGGTATGTTAAGCAACAGATTGCGAAAAAGGAGAAGCGATTTGCTGATCCTGAACAGCAGGAAGTTGTGTGTAATGGGGAGCTGCTTGAGGATCAGAGGGTTATTGATAATATCTGCAGTAAATATAATGATGCAGTGATTCACCTTCTTGTTAGGGTGAAGTATGTGGAAGTTAAGACAGGACAAGATGAGTTGTCCATTGTCACAAAGGAATTGAGTGATACAAAGGATTATGATGTTAGTGAAAATAACAGTAGGAGAAAGTATGATGTTAGTAAAGAAGATACAGGAAGGGAGTATGGAGTCGTTGAGCCAATTGTGCCAAGGAAGGCTCTTGAAAGGGATCTTCTTCTGGAGCCAGTTATTGTTAATAAGAAAATTGAGTTAGCTTCAGGGATTTGGAATATGATAAACTCTACATATGAAGGGCTAGACAGTGGAAATTATCCAATCAGATCTGCAGAGGGTACAGGGGGAGCTTACTTTATGCTTGATTCAACTGGGCAAAGGTATATATCTGTCTTTAAGCCCATTGATGAAGAGCCAATGGCTATGAATAACCCTAGAGGTTTACCTTTCTCGGTAGATGGTGAAGGCTTGAAGAAGGGTACGAGAGTTGGTCAGGGAGCATTCAGAGAAGTTGCAGCTTATATTTTGGATCATCCAATGAGTGGCCGCCGATCACTATTTGGTTATGAGAAGGGTTTTGCCGGGGTTCCCCCGACTGTTATGGTTAAGTGCTTGCATAAAGGATTTAACCATCCTGGGGACTTGACTGCTAAGATTGGCTCCTTGCAAATGTTCATGGAGAATAATGGAAGCTGCGAGGATATGGGCCCTGGGGCTTTCCCAGTGAAGGAAGTGCATAAAATTTCGGTACTGGACATGCGACTCGCAAATGCTGATAGACATGCTGGGAATATTTTGATTGGCAAACAGGAGGAAAATGACCAGGCTGTTTTGATTCCAATTGATCATGGATACTGCTTGCCCACAAGTTTTGAAGATTGTACCTTTGAATGGCTTTATTGGCCTCAGGCTCGCCAGCCATACTCCCCAGAGATCATTGAGTATATAAAGTCACTGGATGCTGATAAAGATATTGCCCTTCTGAAGTATCATGGATGGGTTCTGCCAGTTGAATGTGCCCGCACTCTTCAAATCTCAACCATGCTTCTGAAAAAAGGAGTGGAGAGAGGGATGACCCCCTTTGCCATTGGAAGCCTTATGTGCCGAGAATCCTTGAACAAGGAGTCCGTGATTGAGGGAATTGTAAAGGCAGCTCTGGATTCTGTTCTTCCTGGCACCAGTGAAGCCACATTTCTTGATGCTGTTTCTGAAATCATGGACCAGCACCTTGATGAGATCACTGGTTCCATCTCTTAA 1791 0.4422 MSSAGVTILSPVPRELLLSPNGYYTPWHLSLVPDFFIYLSHSGSLTPMRVLPCDTIESVKLKIQKSEGLPSLTNKQKLVCDGRELARSNSLLKDYGVTEGNVLHLVIRLSDLQTISVRTSSGKEFTFQVERSRDVGYVKQQIAKKEKRFADPEQQEVVCNGELLEDQRVIDNICSKYNDAVIHLLVRVKYVEVKTGQDELSIVTKELSDTKDYDVSENNSRRKYDVSKEDTGREYGVVEPIVPRKALERDLLLEPVIVNKKIELASGIWNMINSTYEGLDSGNYPIRSAEGTGGAYFMLDSTGQRYISVFKPIDEEPMAMNNPRGLPFSVDGEGLKKGTRVGQGAFREVAAYILDHPMSGRRSLFGYEKGFAGVPPTVMVKCLHKGFNHPGDLTAKIGSLQMFMENNGSCEDMGPGAFPVKEVHKISVLDMRLANADRHAGNILIGKQEENDQAVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSPEIIEYIKSLDADKDIALLKYHGWVLPVECARTLQISTMLLKKGVERGMTPFAIGSLMCRESLNKESVIEGIVKAALDSVLPGTSEATFLDAVSEIMDQHLDEITGSIS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0541 596 Pfam Ubiquitin family 42 109 IPR000626 GO:0005515
Aed2g0541 596 Pfam Ubiquitin family 115 188 IPR000626 GO:0005515
Aed2g0541 596 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 282 575 IPR000403 -
Aed2g0541 596 SUPERFAMILY Protein kinase-like (PK-like) 427 592 IPR011009 -
Aed2g0541 596 ProSiteProfiles Ubiquitin domain profile. 113 172 IPR000626 GO:0005515
Aed2g0541 596 Gene3D - 115 189 - -
Aed2g0541 596 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 595 - -
Aed2g0541 596 SUPERFAMILY Ubiquitin-like 107 187 IPR029071 -
Aed2g0541 596 ProSiteProfiles Ubiquitin domain profile. 54 108 IPR000626 GO:0005515
Aed2g0541 596 SMART ubq_7 35 108 IPR000626 GO:0005515
Aed2g0541 596 SMART ubq_7 113 187 IPR000626 GO:0005515
Aed2g0541 596 Gene3D - 35 114 - -
Aed2g0541 596 Pfam Phosphatidylinositol 3- and 4-kinase 291 540 IPR000403 -
Aed2g0541 596 SUPERFAMILY Ubiquitin-like 35 109 IPR029071 -
Aed2g0541 596 CDD Ubl_ubiquitin_like 115 185 - -
Aed2g0541 596 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 595 IPR044571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0541 Aed-Chr2 3920658 3923829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0541 1 590 Acyl Lipid Metabolism Gene Families AT5G24240 54.027 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0541 - - gmx:100815111 1106.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0541 2 3920658 3923829 Aed2g0541 2 3920658 3923829 ECH
Aed11g1790 11 21250563 21253588 Aed2g0541 2 3920658 3923829 ECH