Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0341 ATGTTTGGGATCTTAGGAGGCAAAGGCCACAAGATCAAGGGGACTGTGGTGTTGATGAGCAAGAATGTGTTGGACTTTAATGAAATAGTGTCAACTTCTCAGGGCGGTGTGCGTGGCGTTGCAACCGGCATCTTTGGCATGGCCACCGGTGTAGTTGGCGGAATAGTTGATGGTGCTACTTCCATATTCAGCCGTAACATTGCCATACAGTTGATCAGTGCCACCAAGACTGATGGACTTGGAAATGGGAAGGTTGGAAAGCAAACCTATTTGGAGAAACATCTTCCTTCGTTACCAACCTTGGGAGATAGACAAGATGCATTCAGCGTTTATTTTGAATGGGATAGTGATTTTGGAATTCCAGGAGCTTTTTACATAAAAAACTTTATGCAATCTGAGTTTTTCCTTGTCAGTGTCACTCTTGAAGACATTCCTAATCATGGAACCCTTAACTTTGTTTGCAACTCTTGGGTTTACAATGCTAAAAGTTACAAGAGGGATCGTATTTTCTTTGCTAATAAGACATATGTTCCAAATGAAACTCCAACTCCACTAGTGAAGTACAGAAAAGAAGAATTGGAAAATCTAAGAGGAGATGGAAAAGGAGAGCGCAAGGAACATGATAGGATCTATGATTATGATGTCTATAATGATTTGGGCAACCCAGATAAAAGCAATGATCTTGCTCGTCCTGTTCTTGGAGGCTCTAGTGAATATCCATACCCTCGCAGGGGAAGAACTGGTAGAAAACCAACAAGGAAAGACCCTGAGAGTGAGTCACCATCCAGCAGCACTTACATCCCAAGAGATGAGAATTTTGGTCACTTGAAGTCATCAGACTTTCTTACATATGGAATAAAGTCCATATCTCAAACCGTTTTACCTACATTTCAATCTGCATTTGGTTTAAATGCTGAGTTTGATAAGTTTGACGACGTGCGTGGACTCTTTGAAGGTGGAATTCACCTCCCTACAGATGCACTCAGCAAAATTAGCCCCATACCAGTGCTCAAGGAAATCTTCCGCACTGATGGTGAACAAGTCCTTAAGTTTCCACCACCTCATGTCATCAAGGCAGTTAGTAAGTCTGCATGGATGACTAATGAAGAATTTGGAAGAGAGATGCTTGCTGGTGTTAATCCTTGCCTAATTGAACGCCTTCAGGTGTTCCCGCCAAAGAGCAAGCTAGATCCCACGGTGTATGGTGATCAAACTAGTACAATAACCAAAGAACACTTGGAGATCAACCTTGGTGGACTCAGTGTGGAACAGGCACTGAGTGGTAATAGATTGTTCATATTGGATCACCATGATGCATTCATTCCATATACGAGGAAGATAAATGACCTGCCAACTGCAAAGTCTTATGCCACAAGGACCATCCTTTTCTTGAAAGATGATGGCACATTGAAGCCATTGGCCATTGAATTGAGTTTACCACATCCAAGGGGGGATGAGTTTGGTGCTGTTAGTAGAGTCATCTTGCCAGCAGACCAAGGTGCTGAAAGCACAATTTGGCTACTGGCCAAGGCTTATGTTGTTGTCAATGACTCCTGCTATCATCAACTCATGAGCCACTGGTTAAACACTCATGCCGTGATTGAGCCATTTGCTATAGCAACAAACAGGCATCTCAGTGTGCTCCACCCTGTTTACAAACTTCTGTTACCTCACTATCGTGACACAATGAATATCAATGGACTTGCACGACAATCACTCATCAATGCAGGTGGCATTATTGAGAAATCATTTTTGCCTGGGCCATTCGCTGTGGAGATGTCTTCAGCGGTTTACAAGAGTTGGGTTTTCACTGATCAAGCCCTTCCTGCGGATCTTATCAAGAGAGGAATAGCAGTTGAGGATCCATCCTCTCCCTATGGCCTTCGGCTAGTGATAGATGACTACCCTTATGCTGTTGATGGACTAGAGATATGGAGTGCTATTCAGGCATGGGTTAAAGACTATATCTCCTTGTATTATGCCACAGATGATGCAGTTAAGAAAGACTCTGAACTCCAAACTTGGTGGAAGGAAGCTGTTGAGAAGGGTCACGGTGACTTGAAAGACAAGCCATGGTGGCCTAAGCTGAACACTCTTCATGATCTGATTCACATCTGCAGCATCATTATATGGACTGCTTCAGCACTCCATGCAGCTGTGAATTTTGGACAATACCCTTATGGCGGTTTCATCCTAAACCGTCCAACTCTAACTAGAAGATTGCTCCCAGAGCCAGGAACCAAAGAGTATGGTGAACTCACCAGCAATCACCAGAAGGCTTATTTGAGAACAATCACAGGGAAGACTGAGGCACTTGTGGACTTAACAGTGATAGAGATATTGTCAAGGCATGCTTCTGATGAGGTCTATCTTGGACAGAGGGATAATCCAAATTGGACTGATGACGCAAAGGCAGTTCAAGCATTTAAGAGGTTTGGAAACAAGCTGAAGGATATTGAGGACAAAATCTCTGGAAGGAACAAGAATTCAAGCCTTAGAAACCGTAATGGACCGGTTCAGGTTCCCTACACTGTGCTGCTTCCTACCAGTGGAGAAGGTCTCACTTTCAGAGGAATTCCCAACAGCATCTCTATCTAA 2598 0.4353 MFGILGGKGHKIKGTVVLMSKNVLDFNEIVSTSQGGVRGVATGIFGMATGVVGGIVDGATSIFSRNIAIQLISATKTDGLGNGKVGKQTYLEKHLPSLPTLGDRQDAFSVYFEWDSDFGIPGAFYIKNFMQSEFFLVSVTLEDIPNHGTLNFVCNSWVYNAKSYKRDRIFFANKTYVPNETPTPLVKYRKEELENLRGDGKGERKEHDRIYDYDVYNDLGNPDKSNDLARPVLGGSSEYPYPRRGRTGRKPTRKDPESESPSSSTYIPRDENFGHLKSSDFLTYGIKSISQTVLPTFQSAFGLNAEFDKFDDVRGLFEGGIHLPTDALSKISPIPVLKEIFRTDGEQVLKFPPPHVIKAVSKSAWMTNEEFGREMLAGVNPCLIERLQVFPPKSKLDPTVYGDQTSTITKEHLEINLGGLSVEQALSGNRLFILDHHDAFIPYTRKINDLPTAKSYATRTILFLKDDGTLKPLAIELSLPHPRGDEFGAVSRVILPADQGAESTIWLLAKAYVVVNDSCYHQLMSHWLNTHAVIEPFAIATNRHLSVLHPVYKLLLPHYRDTMNINGLARQSLINAGGIIEKSFLPGPFAVEMSSAVYKSWVFTDQALPADLIKRGIAVEDPSSPYGLRLVIDDYPYAVDGLEIWSAIQAWVKDYISLYYATDDAVKKDSELQTWWKEAVEKGHGDLKDKPWWPKLNTLHDLIHICSIIIWTASALHAAVNFGQYPYGGFILNRPTLTRRLLPEPGTKEYGELTSNHQKAYLRTITGKTEALVDLTVIEILSRHASDEVYLGQRDNPNWTDDAKAVQAFKRFGNKLKDIEDKISGRNKNSSLRNRNGPVQVPYTVLLPTSGEGLTFRGIPNSISI 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0341 865 Pfam PLAT/LH2 domain 82 171 IPR001024 GO:0005515
Aed2g0341 865 ProSitePatterns Lipoxygenases iron-binding region signature 1. 521 535 IPR020833 GO:0016702|GO:0046872
Aed2g0341 865 PANTHER LIPOXYGENASE 1 865 - -
Aed2g0341 865 MobiDBLite consensus disorder prediction 221 271 - -
Aed2g0341 865 ProSitePatterns Lipoxygenases iron-binding region signature 2. 548 558 IPR020834 GO:0016702|GO:0046872
Aed2g0341 865 Gene3D - 499 864 - -
Aed2g0341 865 SUPERFAMILY Lipoxigenase 178 865 IPR036226 -
Aed2g0341 865 Gene3D - 277 362 IPR027433 -
Aed2g0341 865 PRINTS Lipoxygenase signature 503 520 IPR013819 GO:0016702|GO:0046872
Aed2g0341 865 PRINTS Lipoxygenase signature 521 538 IPR013819 GO:0016702|GO:0046872
Aed2g0341 865 PRINTS Lipoxygenase signature 541 561 IPR013819 GO:0016702|GO:0046872
Aed2g0341 865 Gene3D - 177 276 - -
Aed2g0341 865 Pfam Lipoxygenase 185 848 IPR013819 GO:0016702|GO:0046872
Aed2g0341 865 PRINTS Plant lipoxygenase signature 207 223 IPR001246 GO:0016491
Aed2g0341 865 PRINTS Plant lipoxygenase signature 349 365 IPR001246 GO:0016491
Aed2g0341 865 PRINTS Plant lipoxygenase signature 142 160 IPR001246 GO:0016491
Aed2g0341 865 PRINTS Plant lipoxygenase signature 778 792 IPR001246 GO:0016491
Aed2g0341 865 PRINTS Plant lipoxygenase signature 240 259 IPR001246 GO:0016491
Aed2g0341 865 PRINTS Plant lipoxygenase signature 389 408 IPR001246 GO:0016491
Aed2g0341 865 PRINTS Plant lipoxygenase signature 456 480 IPR001246 GO:0016491
Aed2g0341 865 PRINTS Plant lipoxygenase signature 168 189 IPR001246 GO:0016491
Aed2g0341 865 PRINTS Plant lipoxygenase signature 304 325 IPR001246 GO:0016491
Aed2g0341 865 PANTHER LIPOXYGENASE 1 865 IPR000907 GO:0016702|GO:0046872
Aed2g0341 865 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 9 176 IPR036392 GO:0005515
Aed2g0341 865 ProSiteProfiles PLAT domain profile. 45 172 IPR001024 GO:0005515
Aed2g0341 865 SMART LH2_4 10 173 IPR001024 GO:0005515
Aed2g0341 865 CDD PLAT_LH2 10 173 IPR042057 -
Aed2g0341 865 Gene3D - 363 498 - -
Aed2g0341 865 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 175 865 IPR013819 GO:0016702|GO:0046872
Aed2g0341 865 Gene3D PLAT/LH2 domain 2 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0341 Aed-Chr2 2261226 2265988 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0341 1 865 Acyl Lipid Metabolism Gene Families AT1G55020 55.468 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0341 K15718 - gmx:100127399 1645.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0341 2 2261226 2265988 Aed1g1339 1 12480788 12484389 PCT