Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0315 ATGTCTTCTATTTTGCTGTTAACTCTCTTTTCTCTCATTTGTGGAAATCTTCAGACTCTATCTTCTGATTCTTCAAATCAACCTTACAGAACTGCTTATCACTTTCAACCTCCCCAGAATTGGATAAATGGACCATTGAGATATGGAGGACTTTATCACCTGTTCTATCAATACAATCCTAAAGGTGCAGTTTGGGGAAATATTGTGTGGGCACATTCAGTGTCAAAGGATCTTGTGAACTGGACCCCACTAGATCCTGCCATCTTTCCATCTCAACCGTCCGATATAAATGGTTGTTGGTCAGGATCAGCCACACTGCTTCCTGGGAACAAACCAGCCATTCTATACACTGGAATTGACCCATTGAATCACCAAGTTCAAAACTTGGCCCTACCCAAAAATTTATCTGACCCATTTCTTAGAGAATGGATCAAGTCCCCCAAAAATCCTCTAATGGCACCAACTATTGCTAACAAGATCAATTCAAGTTCATTTAGGGACCCAACCACTGCTTGGCTAGGCAAAGATGGACATTGGAGAGTACTTGTTGGAAGCAAAAGAGGAACTAGAGGATTTGCAATTTTGTATAGGAGCAAAGACTTTGTTAATTGGGTTCAAGCCAAACACCCTTTGCACTCAACCTTAGGAAGTGGAATGTGGGAGTGTCCTGATTTTTTTCCTGTTTTGAATGATGGCCAATTGGGTGTTGACACGTCGGCGAATGATGGTGATGTTAGGCACGTGCTCAAGGTTAGCTTGGATGACAAAAAACATGATTACTATATGATTGGGAGTTACAATGCTGCCAAAGATAAGTTTATCCCGGATGATGAAGATTCTAATGAATTTCTTTTAAGATATGATTATGGAAAGTACTATGCATCAAAAACTTTCTTTGATGATGGGAAGAATAGAAGGATTTTGCTTGGGTGGGTCAATGAATCCTCTAGTGTTGCTGATGATATCAAGAAAGGTTGGTCTGGAATCCATACAATTCCAAGGGCTATATGGCTTCATAAGTCTGGTAAAGAGTTGGTACAGTGGCCAGTGGTGGAAGTTGAAAAGCTGCGTGCATACCCAGTCAACTTGCCACCCCAAGTGCTAAAAGGAGGCAAGTTGCTTCAAATTAATGGTGTCACAGCGACACAGGCTGATGTTGAAATTTCATTTAAAGTGAATAAGTTGAGAAAGGCTGAAGTATTGGAGTATTGGACGGACCCCCAAATTCTGTGTAGCAAAAGGGGTTCATCTGTTAAAAGTGGATTAGGTCCGTTTGGTCTGATAGCTCTTGCATCAGATGGATTGGAGGAGTACACATCAGTTTTCTTCAGAATATTCAGATACCAAAACAAATATTTGGTGCTTTTGTGCAGTGACCAAAGCAGGTCTTCCTTAAATAAAGACAATGATTTAACTACTTATGGAACTTTTGTGGACGTGGACCCTCTTCATGAGAAGCTATCATTGAGAACCTTGATTGATCATTCTGTCGTGGAGAGTTTTGGAGGAGAAGGAAGAGCTTGCATCACAGCCAGAGTTTATCCCACATTGGCAATCAATGATAAAGCACGACTTTATGCTTTCAATAATGGAACTTCTGATGTCAAGATTACAAAACTGAATGCTTGGAGCATGAAGAAAGCACTAATCAAATGA 1656 0.4052 MSSILLLTLFSLICGNLQTLSSDSSNQPYRTAYHFQPPQNWINGPLRYGGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDPAIFPSQPSDINGCWSGSATLLPGNKPAILYTGIDPLNHQVQNLALPKNLSDPFLREWIKSPKNPLMAPTIANKINSSSFRDPTTAWLGKDGHWRVLVGSKRGTRGFAILYRSKDFVNWVQAKHPLHSTLGSGMWECPDFFPVLNDGQLGVDTSANDGDVRHVLKVSLDDKKHDYYMIGSYNAAKDKFIPDDEDSNEFLLRYDYGKYYASKTFFDDGKNRRILLGWVNESSSVADDIKKGWSGIHTIPRAIWLHKSGKELVQWPVVEVEKLRAYPVNLPPQVLKGGKLLQINGVTATQADVEISFKVNKLRKAEVLEYWTDPQILCSKRGSSVKSGLGPFGLIALASDGLEEYTSVFFRIFRYQNKYLVLLCSDQSRSSLNKDNDLTTYGTFVDVDPLHEKLSLRTLIDHSVVESFGGEGRACITARVYPTLAINDKARLYAFNNGTSDVKITKLNAWSMKKALIK 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0315 551 SUPERFAMILY Arabinanase/levansucrase/invertase 25 350 IPR023296 -
Aed2g0315 551 Gene3D Glycosyl hydrolase domain; family 43 38 359 IPR023296 -
Aed2g0315 551 SMART glyco_32 34 505 IPR001362 GO:0004553|GO:0005975
Aed2g0315 551 Pfam Glycosyl hydrolases family 32 N-terminal domain 34 349 IPR013148 -
Aed2g0315 551 PANTHER CELL-WALL INVERTASE 14 550 - -
Aed2g0315 551 Pfam Glycosyl hydrolases family 32 C terminal 352 544 IPR013189 -
Aed2g0315 551 CDD GH32_Fruct1-like 40 338 - -
Aed2g0315 551 Gene3D - 360 545 - -
Aed2g0315 551 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 14 550 - -
Aed2g0315 551 SUPERFAMILY Concanavalin A-like lectins/glucanases 349 548 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0315 Aed-Chr2 2084046 2087181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0315 48 550 Glycoside Hydrolase AT3G13790 67.054 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0315 K01193 - gmx:547681 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1359 1 12588239 12590734 Aed2g0315 2 2084046 2087181 PCT