Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1359 ATGGCCATATCTCCAATTTTGTTGTTGTCTATCTTCTCTCTCATTTATGGCATTGGTGTTCTTCTTCCCATTGAAGCTACCCACCATGTTTTCCAAAATCTTCAGACTCTATCTTCTGATTCCTCTGATCAACCTTATAGAACTGCTTACCACTTTCAACCTCCAAAGAATTGGATAAATGGACCAATGAGATACAAGGGACTTTACCATCTGTTCTATCAATACAATCCAAATGGTGCTGTTTGGGGCAATATTGTCTGGGCCCACTCAGTATCAAAGGATCTGGTGAATTGGAGTCCACTGGATCCTTCCATCTACCCTTCTCAACCGTCTGATATCAACGGTTGTTGGTCAGGATCAGCCACAATACTTCCTGGGGGCAAACCAGCCATTTTATACACAGGAATTGACCCTAATAACCACCAAGTTCAAAACTTAGCCATACCCAAAAACATGTCTGACCCATTACTTAGGGAATGGGTTAAGTCACCTAAAAATCCACTAATGGCACCAACTGTTTCTAACAATATAAATTCAAGCTCATTTAGGGACCCTACCACAGCTTGGGTAGGCAAAGATGGGTACTGGAGGGTTCTCATTGGAAGCAAAATACACACTAGGGGTATCGCCATTTTATACAAGAGCAAAAACTTTGTTGATTGGGTTCAAGCCAAACAACCCCTACACTCAGCAGAAGGCACTGGAATGTGGGAGTGCCCTGATTTCTATCCAGTGCTGAACAAGGGTCCATCAACTAATGGTGTTGACACATCTGTGAATGGTGATAATGTTAGGCATGTTCTTAAGGTCAGTTTGGATGATACAAAACATGATTATTATTTGATTGGGACTTATGACATTGCCAAGGATATCTTCACTCCGGATAACGGATTCGAGAATAGCCAAACTGTCTTAAGATATGACTATGGGAAATATTATGCTTCAAAAACGATTTTTGAGGATGGAAAAAACAGAAGGGTCTTATTTGGCTGGGCTAACGAATCCTCAAGTGTTCCCGATGATATCAAGAAGGGATGGTCCGGAATCCATACTATTCCAAGAGCCATTTGGCTTCATAAATCGGGAAAACAGTTGGTGCAATGGCCGGTTGTGGAAATTGAAAGCTTGCGTGTGAACCCTGTCTACTGGCGCACCAAACTTGTCAAAGGTGGTGAACTGCTTCAAGTTACTGCTGTTACTGCGGCACAGGCTGACGTTGAAATTTCATTTGAAGTGAATGAGTTAGGAAAGGCCGAAGTATTGGACCAATGGGTGGATCCCCAAATTCTATGTAGTAGAAAGGGTGCAGCCGTAAAAGGTGGTTTGGGACCCTTTGGTCTGCTAGTTTTTGCTTCTGGTGGCTTGCAAGAGTGCACGGCAGTGTTTTTTAGAATATTTAGATACCAAAATAATAATTTGGTTCTCATGTGTAGCGACCAAACCAGATCCTCTTTGAATAAAGCTAACGATTTGACCACCTATGGGACTTTTGTGGACATCGATCCTCTTCATGAGAAGCTGTCACTAAGAACTTTGATTGATCACTCAGTGGTGGAGAGTTTTGGAGGAGAAGGAAGGGCCTGCATCACAGCGAGAGTATATCCCACAATAGCAATCAATGAAAAGGCACAACTATATGCTTTCAATAATGGAACTGCCGCTGTCAATATCGCAAGATTGAGTGCTTGGAGCATGAACAAGGCAGTAATCAACTGA 1716 0.4242 MAISPILLLSIFSLIYGIGVLLPIEATHHVFQNLQTLSSDSSDQPYRTAYHFQPPKNWINGPMRYKGLYHLFYQYNPNGAVWGNIVWAHSVSKDLVNWSPLDPSIYPSQPSDINGCWSGSATILPGGKPAILYTGIDPNNHQVQNLAIPKNMSDPLLREWVKSPKNPLMAPTVSNNINSSSFRDPTTAWVGKDGYWRVLIGSKIHTRGIAILYKSKNFVDWVQAKQPLHSAEGTGMWECPDFYPVLNKGPSTNGVDTSVNGDNVRHVLKVSLDDTKHDYYLIGTYDIAKDIFTPDNGFENSQTVLRYDYGKYYASKTIFEDGKNRRVLFGWANESSSVPDDIKKGWSGIHTIPRAIWLHKSGKQLVQWPVVEIESLRVNPVYWRTKLVKGGELLQVTAVTAAQADVEISFEVNELGKAEVLDQWVDPQILCSRKGAAVKGGLGPFGLLVFASGGLQECTAVFFRIFRYQNNNLVLMCSDQTRSSLNKANDLTTYGTFVDIDPLHEKLSLRTLIDHSVVESFGGEGRACITARVYPTIAINEKAQLYAFNNGTAAVNIARLSAWSMNKAVIN 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1359 571 SUPERFAMILY Arabinanase/levansucrase/invertase 42 370 IPR023296 -
Aed1g1359 571 Gene3D - 380 565 - -
Aed1g1359 571 Gene3D Glycosyl hydrolase domain; family 43 55 379 IPR023296 -
Aed1g1359 571 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 571 - -
Aed1g1359 571 Pfam Glycosyl hydrolases family 32 N-terminal domain 51 369 IPR013148 -
Aed1g1359 571 CDD GH32_Fruct1-like 57 358 - -
Aed1g1359 571 Pfam Glycosyl hydrolases family 32 C terminal 372 564 IPR013189 -
Aed1g1359 571 PANTHER CELL-WALL INVERTASE 2 571 - -
Aed1g1359 571 SMART glyco_32 51 525 IPR001362 GO:0004553|GO:0005975
Aed1g1359 571 SUPERFAMILY Concanavalin A-like lectins/glucanases 369 568 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1359 Aed-Chr1 12588239 12590734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1359 63 571 Glycoside Hydrolase AT3G13790 64.797 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1359 K01193 - gmx:100776791 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1359 1 12588239 12590734 Aed2g0315 2 2084046 2087181 PCT