Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0303 ATGACTGATAGGGTGCACCCTTCGGCCAAAACCACCACCAACGGCGCCCCCAAACAGACATTCCCCGCCACGAAATCGCAGCTTTCCGGCGCCAACCGCCCCACCTACCGCCCCCAACCACCCCGCCGCCGCCGCAGCCGGGGATGCGCCTCCACCCTATGCTGCTACCTCCTCCTGATCCTCCTCTTCCTCCTCCTCCTCATCGGCGGCTCTGGCACCGTCCTCTACTTCCTCTACCGCCCCCACCGCCCCACGTTCTCCGTCACCTCCCTCAAACTCTCCTCCTTCCACCTCACCTCTCCCTCCACCATCAACGCCAAGTTCGACCTCAGTCTCTCAACCACAAACCCCAACGACAAAATAATCTTCTCCTACGACCCCACCTCCGTCTCCCTCCTCTACGGCGACACCGCCATCGCCACCACCACCATCCCTTCCTTCCTCCACCGCCAAAGGAACACCACCGTGCTCGAAGCTTATGTTACTAGCACCGAGGAAGCCGTGGATAGCGACTCTGCCATGGAGCTGAAGAGGAGCGTGAAGAGGAAGAGCGAGGTAGCACTCAAGGTGAAGTTGGAGACCAAAGTGGAGGCCCAGATGAGCGTGTTCCAGACGCCGCGAGTAGGAATAACGGTTTTGTGCGACGGCGTCGCCGTCTCTCTCCCAGACGGCGCGAAGCCGGCGACGGCGTCCGCTGAGAATACGGAGTGCCAAGTGGATGTCAGGTTCAAGGTCTGGAAATGGACTGTAGGATGA 756 0.6071 MTDRVHPSAKTTTNGAPKQTFPATKSQLSGANRPTYRPQPPRRRRSRGCASTLCCYLLLILLFLLLLIGGSGTVLYFLYRPHRPTFSVTSLKLSSFHLTSPSTINAKFDLSLSTTNPNDKIIFSYDPTSVSLLYGDTAIATTTIPSFLHRQRNTTVLEAYVTSTEEAVDSDSAMELKRSVKRKSEVALKVKLETKVEAQMSVFQTPRVGITVLCDGVAVSLPDGAKPATASAENTECQVDVRFKVWKWTVG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0303 251 Pfam Late embryogenesis abundant protein 112 212 IPR004864 -
Aed2g0303 251 MobiDBLite consensus disorder prediction 1 46 - -
Aed2g0303 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 2 249 - -
Aed2g0303 251 Gene3D - 78 211 - -
Aed2g0303 251 SUPERFAMILY LEA14-like 61 197 - -
Aed2g0303 251 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 2 249 - -
Aed2g0303 251 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0303 Aed-Chr2 1999102 1999857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0303 36 236 EF-hand Containing Proteins AT5G21130 24.528 1.35e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0303 - - gmx:102669753 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1364 1 12640656 12641417 Aed2g0303 2 1999102 1999857 PCT