Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1364 ATGACAGACAGGGTGTACCCATCGGCCAAGCCCGCCGCCGTTAACGGCGCCACCGCCAATCCGACTTTTCCAGCGACAAAGGCTCAACTTTACGGCGCCAGCCGCCCCGCCTACCGCCCGCAGCCCCACCACCGGCGCCGGAGCCGTCGCGGGTGCTGCTGCACCTTCTTCTTCTGGCTGATCCTGACCGTGCTGATCCTCCTCCTCCTGATCGGAGTCGCCGGCACGGTGTTCTACCTCCTCTACCGCCCCCACCACCCCACCTTCAACGTCACGTCGCTGAAACTCTCTTACCTGAACCTGACCTCATCCTCCACCCTGAACTCACGCTTCGACATCACCGTCTCCGCCACCAACCCCAACAAGAAGATTCTCTTCGCCTACGACCCCACCTCTATCACAATCCTCTCCGGCGAGGTGGACGTCGGCGACGGCACCGTCCCCGCCTTCCAGCACCCTAAGAAGAACACGACGCTGATCAAAGCCTCCATTCTGAGCTCCGGGCACGCGCTCCAGAGCGACGAGGCAACGCGCTTGAAGTCCAGCATGAAGAGCAAGAACGGGTTGCCACTGAAAGTGAATTTAGAAACAAAAGTGAAGGCAAAGATGGGAAATTTGAAAACCCCAAAGGTCGGAATCAGAGTCTCCTGCGACGGAATCAGAGTGACTCTTCCCTCCGGTAAGAAACCGGCCACAGCGTCCACTTCTAACGCCAAGTGCGACGTCAATGTTCGCTTCAAGATCTGGAAATGGACCGTTTGA 762 0.5866 MTDRVYPSAKPAAVNGATANPTFPATKAQLYGASRPAYRPQPHHRRRSRRGCCCTFFFWLILTVLILLLLIGVAGTVFYLLYRPHHPTFNVTSLKLSYLNLTSSSTLNSRFDITVSATNPNKKILFAYDPTSITILSGEVDVGDGTVPAFQHPKKNTTLIKASILSSGHALQSDEATRLKSSMKSKNGLPLKVNLETKVKAKMGNLKTPKVGIRVSCDGIRVTLPSGKKPATASTSNAKCDVNVRFKIWKWTV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1364 253 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 14 252 - -
Aed1g1364 253 SUPERFAMILY LEA14-like 67 209 - -
Aed1g1364 253 Pfam Late embryogenesis abundant protein 114 217 IPR004864 -
Aed1g1364 253 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 14 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1364 Aed-Chr1 12640656 12641417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1364 27 239 EF-hand Containing Proteins AT5G21130 28.704 4.14e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1364 - - gmx:100819194 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1364 1 12640656 12641417 Aed2g0303 2 1999102 1999857 PCT