Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0301 ATGGCTTCAGTTGGTGCAGTCAAATTCTTCTTGTGCCTTGCTCTATGGCTCTGGAACTTTCTACCTCCATCTCAAGGTAGTGAGCACTGGCATAAGAATAGATACCCTTTTATAAGAAATGCAAGCTCATTCTCATCACAATCACCATCAATTTCAACAACCACCATCAATATGGTTTATGACTACATAATAGTGGGAGGTGGCACAGCAGGGTGTCCTTTGGCTGCAACACTATCTCAGAAATTCAGTGTTTTGGTGCTTGAAAGAGGGGGTGTTCCTTTCACAAACCCCAATGTTTCATTTCTTGAGAACTTCCACATTACCTTAGCAGATATTTCACCAACTTCAGCTTCTCAATACTTCATTTCAACTGATGGAGTCTACAATTCAAGGGCAAGGGTCTTGGGAGGTGGCACTTCTATCAATGCTGGCTTCTACACTAGAGCAAGCCCAAGGTTTATAAAGAAGGTGGGGTGGGATGCCAAGCTAGTAAATGAGTCATATCCATGGGTTGAGAAGCAAATTGTTCACCGTCCAAAGTTTTCAGCTTTTCAGAGAGCAGTGAGAGACAGTCTTCTAGACTCTGGTGTGTCACCTTTTAATGGCTTCACCTATGATCATCTCTATGGAACAAAGGTTGGTGGAACCATTTTCGACAGATTTGGCCGCCGCCACACGGCTGCTGAATTGCTTGCTTCAGGGAACCGTGACAAACTTACTGTTTTGGTCTATGCCAGTGTCCAAAAGATTGTGTTTGATACAAAAGGAAAGAAACCAAAAGCTGTGGGGGTTATTTTCCAAGATGAACATGGGAAACAGCATGAGGCTTTTCTGTCAAATGATAGCCATAGTGAAGTGATAATGTCTAGTGGGGCAATTGGGACTCCTCAGTTGCTAATGCTTAGTGGAATTGGACCAAAAGAAGAACTCCAGAAATTGAACATCCAAGTGGTCCTTGACAACCACTTTGTTGGGAAAGGAATGGTAGACAATCCCATGAACACAATGTTTGTTCCTTCTAAAAGACCAGTTTATCAGTCACTCATAGAAACTGTTGGTATCACCAAGAAGGGGGTGTACATTGAGGCTAGCAGTGGGTTTAGTCAGTCCAATGATAGCATTCACTGTCACCATGGTATCATGTCAGCTGAGATTGGGCAGCTGTCCACAATTCCTCCTAAGCAAAGATCACGAGAAGCGGTTCAAGAATTTATCAAGAACAAGAAAGACATACCGGTTGAACTATTCAAGGGAGGTTTTATTCTGTCAAAAGTTGCCAATCCTTGGTCAGTAGGTGAGCTCAGGCTGAACAACACCAATGTGAAGGACAACCCTGTGGTTACCTTCAACTACTTCAGTCATCCATATGATCTTCATCGCTGTGTCAAGGGGATCCGCTTGGCTATTAAGGTTGTCCAGTCAAAATACTTCACAAACTACACTCAGTGTCACAAAAAAACCACAGAGGAACTGCTCAACCTCACTGTCAAGGCTAATGTCAACTTCATACCCAAGCATCCCAATGACACGTCGTTGATAGCACAGTTCTGCAAAGACACTGTGATCACAATTTGGCACTACCATGGAGGGTGCCATGTGGGGAAGGTAATCAGCCCTGATTACAAGGTTCTTGGCGTTGACAGACTCCGCGTGGTGGATGGCTCAACATTTGATGAATCACCAGGAACAAATCCTCAAGCAACTGTCATGATGATGGGCAGGTACATGGGGCTGAAGATTTTGAGAGATAGGTTGGGGAAATTGGCTGGTATATAA 1776 0.4386 MASVGAVKFFLCLALWLWNFLPPSQGSEHWHKNRYPFIRNASSFSSQSPSISTTTINMVYDYIIVGGGTAGCPLAATLSQKFSVLVLERGGVPFTNPNVSFLENFHITLADISPTSASQYFISTDGVYNSRARVLGGGTSINAGFYTRASPRFIKKVGWDAKLVNESYPWVEKQIVHRPKFSAFQRAVRDSLLDSGVSPFNGFTYDHLYGTKVGGTIFDRFGRRHTAAELLASGNRDKLTVLVYASVQKIVFDTKGKKPKAVGVIFQDEHGKQHEAFLSNDSHSEVIMSSGAIGTPQLLMLSGIGPKEELQKLNIQVVLDNHFVGKGMVDNPMNTMFVPSKRPVYQSLIETVGITKKGVYIEASSGFSQSNDSIHCHHGIMSAEIGQLSTIPPKQRSREAVQEFIKNKKDIPVELFKGGFILSKVANPWSVGELRLNNTNVKDNPVVTFNYFSHPYDLHRCVKGIRLAIKVVQSKYFTNYTQCHKKTTEELLNLTVKANVNFIPKHPNDTSLIAQFCKDTVITIWHYHGGCHVGKVISPDYKVLGVDRLRVVDGSTFDESPGTNPQATVMMMGRYMGLKILRDRLGKLAGI 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0301 591 Gene3D - 177 523 - -
Aed2g0301 591 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 591 - -
Aed2g0301 591 SUPERFAMILY FAD-linked reductases, C-terminal domain 328 530 - -
Aed2g0301 591 PANTHER OSJNBA0019K04.7 PROTEIN 2 591 - -
Aed2g0301 591 SUPERFAMILY FAD/NAD(P)-binding domain 51 583 IPR036188 -
Aed2g0301 591 Pfam GMC oxidoreductase 428 574 IPR007867 GO:0016614
Aed2g0301 591 Gene3D - 60 573 IPR036188 -
Aed2g0301 591 ProSitePatterns GMC oxidoreductases signature 2. 291 305 IPR000172 GO:0016614|GO:0050660
Aed2g0301 591 PIRSF Alcohol_oxidase 36 590 IPR012132 GO:0050660
Aed2g0301 591 Pfam GMC oxidoreductase 220 332 IPR000172 GO:0016614|GO:0050660
Aed2g0301 591 Pfam GMC oxidoreductase 60 155 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0301 Aed-Chr2 1983809 1990222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0301 60 584 Miscellaneous Gene Families AT5G51950 52.542 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0301 K15403 - gmx:100788704 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1366 1 12651074 12657122 Aed2g0301 2 1983809 1990222 PCT