Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1366 ATGGCGTCCATTGGTGCATTACTCATCAAATTCTCCCTCTGTCTCCTCATCAACTATCTACCACTTTCTCAAGGTAAGCAGAACTGGAATAAAGGGTACCCATTTATAAGGAAAGCAAGCACGTTCTCATTGGGTGAGTCTTATGACTACATAGTAGTGGGGGGTGGCACAGCAGGGTGTCCATTGGCTGCGACTCTGTCCCAGAAGAAGTTCAAAGTTCTGCTTCTTGAAAGAGGAGGAGTCCCTTTCAACAACCCCAATGTCTCGTTTCTGCACAACTTTCACATTACATTGGCCGACACTTCACCAACTTCGGCTTCCCAATACTTCATTTCAACAGACGGAGTTCTCAATGCAAGGGGAAGGGTTTTGGGTGGTGGCACTTCCATTAACGCTGGCTTCTACACTAGAGCTGACCCAAAATTTATAAGTAAGGTGGGGTGGGATACAAAGCTTGTGAATGAGTCATATCCTTGGGTTGAGAAGCAGATAGTTCACCGGCCAAATTTTTCAGATTGGCAGAGAGCAGTTAGGGATGGGCTTCTAGCGGCTGGTGTGTCTCCTTTCAATGGCTTCACTTATGATCATAAGTATGGAACCAAAGTTGGTGGAACCATTTTTGACAGATTTGGCCGTCGCCACACATCTGCTGAATTGCTTTCTTCTGCCAACCCTCGCAAACTTACTGTTTTGATCCATGCCACTGTCCAAAAGATTGTTTTTGATACAACAGGAAAAAGACCAAAAGCTACAGGAGTTATTTTCAAGGATGAACATGGGAAGCAGCATGAGGCATATCTAGGAAATGAGAGGCAGAGTGAGGTGATAGTGTCTAGTGGGGCAATTGGAAGTCCTCAACTGCTATTGCTAAGTGGAATTGGCCCAAAAGCAGAGCTTCAGAAACTGAACATCTCTGTGGTGCTTGACAACCAATTTGTTGGGAAAGGCATGGCTGATAACCCCATGAACACCATTTTTGTTCCTTCCAAGAGACCTGTTCAGCAGTCACTCATAGAAACTGTTGGCATTACCAATTTGGGTGTTTACATTGAGACTAGTTGTGGCTTTGGCCAGTCCAAAGACAGCATCCACTGCCACCATGGTCTCATGTCAGCTGAGATTGGGCAGTTGTCCACAATTCCACCAAAACAAAGATCACGAGAAGCTGTTGAGGCTTTTGTGAAGAGCAAGAAAGACATACCAATTGAAGCATTCAGGGGAGGGTTCATATTGTCAAAAGTTGCGAATCCTTGGTCAACAGGCGAGCTCAAGTTGATAAACACCAACGTGGAGGACAACCCTGCAGTTACCTTCAACTACTTCAGCCACCCTTATGATCTTAAGCGCTGTGTGGAGGGTATTCGCTTGGCAATCAAGGTTGTCCAGTCACAACACGTCACAAACTACACTATGTGTGAGAGAGAAACTGCAGAGAGAATGCTTAACCACAGTGTGCAGGCCAATATCAACCTCATTCCCAAGCATCCCAATGACACTAAGTCAGTAGAGCAGTTTTGTAGAGACTCTGTGATCACTATTTGGCACTACCATGGTGGCTGTCATGTGGGGAAGGTGGTTAACTCTGAGCATAAGGTTCTTGGTGTTGACAGACTCCGTGTGGTAGATGGCTCAACATTTACTGAGTCACCAGGAACCAACCCTCAAGCCACTGTCATGATGATGGGCAGGTACATGGGACTGAAGATTCTAAGGGACAGGTTGGGGAAACTGGCTGGTATTTAA 1743 0.4584 MASIGALLIKFSLCLLINYLPLSQGKQNWNKGYPFIRKASTFSLGESYDYIVVGGGTAGCPLAATLSQKKFKVLLLERGGVPFNNPNVSFLHNFHITLADTSPTSASQYFISTDGVLNARGRVLGGGTSINAGFYTRADPKFISKVGWDTKLVNESYPWVEKQIVHRPNFSDWQRAVRDGLLAAGVSPFNGFTYDHKYGTKVGGTIFDRFGRRHTSAELLSSANPRKLTVLIHATVQKIVFDTTGKRPKATGVIFKDEHGKQHEAYLGNERQSEVIVSSGAIGSPQLLLLSGIGPKAELQKLNISVVLDNQFVGKGMADNPMNTIFVPSKRPVQQSLIETVGITNLGVYIETSCGFGQSKDSIHCHHGLMSAEIGQLSTIPPKQRSREAVEAFVKSKKDIPIEAFRGGFILSKVANPWSTGELKLINTNVEDNPAVTFNYFSHPYDLKRCVEGIRLAIKVVQSQHVTNYTMCERETAERMLNHSVQANINLIPKHPNDTKSVEQFCRDSVITIWHYHGGCHVGKVVNSEHKVLGVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILRDRLGKLAGI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1366 580 Gene3D - 48 562 IPR036188 -
Aed1g1366 580 SUPERFAMILY FAD/NAD(P)-binding domain 45 572 IPR036188 -
Aed1g1366 580 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 580 - -
Aed1g1366 580 SUPERFAMILY FAD-linked reductases, C-terminal domain 317 519 - -
Aed1g1366 580 PANTHER OSJNBA0019K04.7 PROTEIN 2 580 - -
Aed1g1366 580 Gene3D - 166 512 - -
Aed1g1366 580 Pfam GMC oxidoreductase 417 563 IPR007867 GO:0016614
Aed1g1366 580 Pfam GMC oxidoreductase 48 321 IPR000172 GO:0016614|GO:0050660
Aed1g1366 580 PIRSF Alcohol_oxidase 36 579 IPR012132 GO:0050660
Aed1g1366 580 ProSitePatterns GMC oxidoreductases signature 2. 280 294 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1366 Aed-Chr1 12651074 12657122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1366 33 575 Miscellaneous Gene Families AT3G56060 50.274 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1366 K15403 - gmx:100784433 1072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1366 1 12651074 12657122 Aed2g0301 2 1983809 1990222 PCT