Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0300 ATGTGTAGTTATGGTGATGCCATGGTTATTGATGGAGATGGTGTATTCAATGTTTCTGGGATTGAAAGTTTCATGAAGGAGGTGAAGTTGGCTGAATGTGGGCTTTCTTATGCCGTAGTTTCTATAATGGGTCCACAAAGTAGTGGCAAGAGCACGCTCTTAAATAATTTGTTTAGAACCAACTTCAGAGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGATGTGCTGGCATAGAGCCTTGTACACTTGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGAGGAGAGGATGACACTGCTTTTGAAAAGCAGAGTGCTCTATTTGCTCTTGCTGTCTCAGATATAGTGCTAATAAACATGTGGTGCCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCACTTTTGAAAACTGTCTTTCAGGTCATGATGAGATTGTTTAGTCCACGAAAAACAACATTGCTGTTTGTCATACGTGATAAAACAAGGACACCACTTGAAAATTTAGAACCTGTTTTGCGGGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAACCACAGGCCCACAAGGAAACCCCATTGAGTGAATTTTTCAATGTTGAAGTTGTTGCTCTTTCTAGTTATGAAGAAAAGGAAGAGCAATTTAGAGAGCAGGTTGCCAGCTTGCGGCAACGGTTCCAGCATTCTATCACTCCTGGTGGGCTTGCAGGTGATCGGCGTGGAGTAGTTCCTGCTTCTGGCTTTTGTTTTAGTTCTGAGCATATATGGAAAGTCATTAAGGAGAACAAAGATCTCGACCTTCCTGCACATAAGGTTATGGTTGCTACTGTACGATGTGAAGAAATCACCAATGAGAAATATGCATCTTTTGTTGCAAATGAGGATTGGTGTCAATTGGAAGAAGCTGTGCAATCTGGCCCTATTCCTGGATTTGGGAAAAAGCTCAGTTCACTCCTGGATACTTGTTTATCAGGGTATGATGCTGAAGCCACCTATTTTGATGAAGGTGTGAGGTCTTCCAAACAAAAGCAACTACAAGAAAAATTGTTCCAACTTGTCCAACCAGCATTCCAATCTGCGCTGGCACATATAAGAACTGGAACTTTGGATAAATTCAAGGAGGCATTTGACAAGGCTTTGAGAGGAGGAGAAAGGTTTTCTGTGGCTGCTAATAATTGCATTGGGTCTTGTATGGTTCAATTTGATGAAGCATGTACAGATATTGTTATTGAACAAACAAACTGGGATACATCTAAAGTGCGAGAGAAACTGCTACGTGATGTTGATGCACATGTTGCAACTGTACGTGCAACCAAGATTTCTGAACTTACTTCATCATATGAGGAAAAACTTAAACAAGCTTTGTCTGGACCTGTTGAAGCTCTTTTGGATGGAGCTAGTAACGATACTTGGCCATCAATAAGGAACCTTCTTAGGCGTGAGACTGAACCAGCTGTTTCAGGGTTCTCTGCTGCACTTACTGGGTTTGGTATGGATGAAGAAACAAGGCAGAAAATGATTTTGAGTTTAGAGGACTATGCAAGGGGTCTTGTAGAAGGAAAGGCTAGGGAAGAAGCTGGAAGAGTTCTAATCCGCATGAAGGACAGGTTTACGATGTTGTTTAGCCATGATTCTGATTCAATGCCTCGTGTTTGGACGGGTAAAGAAGACATACGAGCCATCACCAAGACTGCTCGCTCTGCTTCTTTGAAGTTGCTATCTGTTATGGCTGCAATTCGTGTGGATGATGATGACACTGACAATATTGAGAAAGTGTTAGCTGTTGCATTGGTGGATTCATCATCAAGTAGTAATGCTACAAGGAGCATCACAATGCTTGATCCACTAGCTTCTAGCAGCTGGGAACAGGTTTCATCCTCTAAAACATTGATTACACCTGTCCAGTGCAAGTCTTTGTGGAGGCAATTCAAGACAGAGACAGAGTACAGTGAGGCCAGCAAGCGCAACAACAACTGGTTACCTCCCCCATGGGCAATAGCTGCTTTGGTTATCCTGGGATTTAATGAATTTATGACACTTCTAAGAAATCCCTTGTATTTGGGTGTCATCTTTGTTGGTTATCTTCTCGTTAAAGCCCTATGGGTGCAGCTTGACGTTTCGGGTGAATTTCGCAATGGAGCCCTTCCGGGAATCATATCCTTGTCTAGCAAGTTTATTCCGACAATCATGAACCTTGTGCAAAAGCTAGCAGAAGAGGGACAGAACCCTGCAGCTAACAATCCTCAAAGAAGAACCCCATCAAAAAACAGTTACAACAATAATGAGGGTCACGCCGTGTCATCCAGCGCATCATCTAACTTGACTGCATTGGACAACGGAAGCGAATATGCGAGTCCAGTAAAAGATGAGTAG 2403 0.427 MCSYGDAMVIDGDGVFNVSGIESFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNNLFRTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSYEEKEEQFREQVASLRQRFQHSITPGGLAGDRRGVVPASGFCFSSEHIWKVIKENKDLDLPAHKVMVATVRCEEITNEKYASFVANEDWCQLEEAVQSGPIPGFGKKLSSLLDTCLSGYDAEATYFDEGVRSSKQKQLQEKLFQLVQPAFQSALAHIRTGTLDKFKEAFDKALRGGERFSVAANNCIGSCMVQFDEACTDIVIEQTNWDTSKVREKLLRDVDAHVATVRATKISELTSSYEEKLKQALSGPVEALLDGASNDTWPSIRNLLRRETEPAVSGFSAALTGFGMDEETRQKMILSLEDYARGLVEGKAREEAGRVLIRMKDRFTMLFSHDSDSMPRVWTGKEDIRAITKTARSASLKLLSVMAAIRVDDDDTDNIEKVLAVALVDSSSSSNATRSITMLDPLASSSWEQVSSSKTLITPVQCKSLWRQFKTETEYSEASKRNNNWLPPPWAIAALVILGFNEFMTLLRNPLYLGVIFVGYLLVKALWVQLDVSGEFRNGALPGIISLSSKFIPTIMNLVQKLAEEGQNPAANNPQRRTPSKNSYNNNEGHAVSSSASSNLTALDNGSEYASPVKDE 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0300 800 CDD GBP 33 239 - -
Aed2g0300 800 Pfam Sey1 three-helix bundle domain 320 749 IPR046758 -
Aed2g0300 800 MobiDBLite consensus disorder prediction 752 800 - -
Aed2g0300 800 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 34 249 IPR030386 GO:0005525
Aed2g0300 800 Hamap Protein SEY1 [SEY1]. 6 751 IPR008803 -
Aed2g0300 800 MobiDBLite consensus disorder prediction 752 790 - -
Aed2g0300 800 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 270 IPR027417 -
Aed2g0300 800 Coils Coil 215 235 - -
Aed2g0300 800 Gene3D - 19 242 IPR027417 -
Aed2g0300 800 PANTHER PROTEIN SEY1 8 770 IPR008803 -
Aed2g0300 800 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 43 278 - -
Aed2g0300 800 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 8 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0300 Aed-Chr2 1971082 1980207 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0300 K22698 - gmx:100780006 1446.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1367 1 12661440 12668594 Aed2g0300 2 1971082 1980207 PCT