Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0298 ATGCTCCTGATCCTATTATTAACACTTGCAATGGCTTCTATTGTGATTATTTCTCTCCAAATAAGGCTTACAAACCAAAGATGTGGACAGAGGCTTGGACTGGCTGGATTGCCCAGACAGCCAAAGTGGGGTCATCTGAAGGATTTACATAGAGCAATAAAGCTCTGTGAACCTGCTTTAGTATCTGCAGATCCTACTGTACAGCGGCTTGGAAACTATGAAGAGGTTGGTTCTCAGAGCACAACGATGAAGATGACTCGTGTTCCTATTCATGGAGGACTATCTTGGAAAGCATTCAATGAAGAGACAACCACTACTGATGATAGTTCCTTCACTGTGACTGGCCTGTTGGAGCAGATAAATGCAACCAGAGATTTATCTGATTACTTGTGGTATTCCACCGATGTTGTGATCAATTCCAATGAAGGATTTTTGAGGAATGGAAAGAATCCTTTTCTTACAGTTTTATCTGCTGGGCATGCTTTGCATGTTTTTATCAACAATCAGCTGTCAGGAACTGCATATGGAAGCTTAGAGGCCCCCAAACTAACCTTTAGTGAAAGTGTGAGGCTCAGAGCTGGTGTTAACAAAATCTCTCTTCTAAGTGTTGCAGTTGGGCTTCCGAATGTTGGTCCACATTTTGAAAGATGGAATGCTGGTGTTCTTGGCCCAATTACATTAAGTGGTCTCAATGAGGGGAGAAGGGACTTAACTTGGCAGAAGTGGTCATACAAGGTTGGTCTTAAAGGTGAAGCCTTGGATCTTCATTCTCTTAGTGGAAGTTCCTCTGTTGATTGGCTTCAAGGGTATTTAGTTTCCAGAAGACAGCCATTGACTTGGTACAAAACTAGCTTTGATGCCCCAGCTGGTGTTGCACCATTGGCTTTAGACATGGGCAGCATGGGCAAAGGTCAAGCGTGGATAAATGGACAAAGTGTGGGTCGCTACTGGCCTGCATACAAAGCATCCGGTTCTTGTGGTTACTGTAACTATGCTGGAACTTATAATGAGAAGAAATGTGGAAGTAACTGTGGCGAGGCTTCTCAACGATGGTATCATGTTCCTCATTCATGGCTGAAGCCAACTGGGAATTTACTGGTTGTGTTTGAGGAATTGGGTGGGGATCCAAACGGGATTTTTTTGGTTAGAAGGGATATAGATAGTGTATGTGCTGATATCTATGAGTGGCAGCCAAATCTTGTAAGTTATCAGATGCAAGCTTCTGGCAAAGTCAGAAGTCCTGTGAGACCAAAAGCACATTTGTCATGCGGTCCTGGACAAAAAATCTCATCAATCAAATTTGCTAGCTTTGGCACTCCAGTAGGGTCTTGTGGAAACTACCGTGAAGGAAGTTGCCATGCTCACAAATCATATGATGCTTTCCAAAAGAATTGTGTTGGCCAGAGCTGGTGCACAGTGACAGTGTCTCCTGAAATTTTTGGAGGAGATCCATGTCCAAGTGTAATGAAGAAGCTCTCAGTGGAGGCCATTTGCACCTGA 1500 0.436 MLLILLLTLAMASIVIISLQIRLTNQRCGQRLGLAGLPRQPKWGHLKDLHRAIKLCEPALVSADPTVQRLGNYEEVGSQSTTMKMTRVPIHGGLSWKAFNEETTTTDDSSFTVTGLLEQINATRDLSDYLWYSTDVVINSNEGFLRNGKNPFLTVLSAGHALHVFINNQLSGTAYGSLEAPKLTFSESVRLRAGVNKISLLSVAVGLPNVGPHFERWNAGVLGPITLSGLNEGRRDLTWQKWSYKVGLKGEALDLHSLSGSSSVDWLQGYLVSRRQPLTWYKTSFDAPAGVAPLALDMGSMGKGQAWINGQSVGRYWPAYKASGSCGYCNYAGTYNEKKCGSNCGEASQRWYHVPHSWLKPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLVSYQMQASGKVRSPVRPKAHLSCGPGQKISSIKFASFGTPVGSCGNYREGSCHAHKSYDAFQKNCVGQSWCTVTVSPEIFGGDPCPSVMKKLSVEAICT 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0298 499 SUPERFAMILY Galactose-binding domain-like 240 407 IPR008979 -
Aed2g0298 499 Pfam Galactose binding lectin domain 421 498 IPR000922 GO:0030246
Aed2g0298 499 ProSiteProfiles SUEL-type lectin domain profile. 413 499 IPR000922 GO:0030246
Aed2g0298 499 PANTHER BETA-GALACTOSIDASE 35 76 - -
Aed2g0298 499 PANTHER BETA-GALACTOSIDASE 76 493 - -
Aed2g0298 499 SUPERFAMILY Galactose-binding domain-like 77 231 IPR008979 -
Aed2g0298 499 PANTHER BETA-GALACTOSIDASE RELATED 35 76 IPR001944 GO:0004553|GO:0005975
Aed2g0298 499 PANTHER BETA-GALACTOSIDASE RELATED 76 493 IPR001944 GO:0004553|GO:0005975
Aed2g0298 499 Gene3D - 270 390 - -
Aed2g0298 499 Gene3D - 406 499 IPR043159 -
Aed2g0298 499 PRINTS Glycosyl hydrolase family 35 signature 303 319 IPR001944 GO:0004553|GO:0005975
Aed2g0298 499 PRINTS Glycosyl hydrolase family 35 signature 276 290 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0298 Aed-Chr2 1953031 1959223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0298 36 498 Glycoside Hydrolase AT3G13750 65.251 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0298 - - gmx:100785688 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0298 2 1953031 1959223 Aed2g0298 2 1953031 1959223 ECH
Aed1g1370 1 12678498 12688558 Aed2g0298 2 1953031 1959223 PCT