Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0281 ATGAACGGTGGTGATGAGGTCATGGCAGCTCCGGCGGGTCCACCGCAGCCGCTGGAGTGGAAATTCTCGCAGGTTTTCGGGGAGCGTACGGCGGGGGAGGAAGTTCAGGAAGTGGATATAATTTCTGCTATTGAATTTGACAAGTCTGGTGATCATCTTGCCACCGGTGATCGTGGTGGTCGAGTAGTTCTCTTTGAGCGGACAGATACAAAAGATCATCGTGGATCAAGAAGGGACTTGGAGAGGATGGACTATTCTATTGGTAGACATCCTGAGTTCCGTTATAAAACAGAGTTTCAGAGTCATGAGCCTGAGTTTGACTATCTTAAGAGTTTGGAAATAGAAGAGAAAATTAACAAAATCAAATGGTGCCAAACAGCTAATGGTGCTCTGTTCCTTCTATCTACAAATGATAAAACCATCAAATTTTGGAAGGTTCAAGAAAAGAAGGTCAAGAAAGTTTCTGACATGAATGTTGATCCTAAAGCAATGGGAAATGGCTCTATTGCTAGTTCAAGTAATTCCAGTAGCTCTAGATCATATCTTGCAAATGGAGTATCTCCAGATGGACCATACAATTATTTAAACAACGATTTCTCATTTCCACCAGGAGGCATACCTTCACTAAGATTACCATTGGTAGTTGTAACCAGCCATGAGACCAGTTTGGTGGCTCGATGTCGTAGAGTATATGCCCATGCTCATGATTATCATATTAATTCTATTTCAAATAACAGCGATGGTGAAACTTTCATATCAGCTGATGATTTACGAATAAATCTTTGGAACCTGGAAATTAGCAATCAAAGTTTTAATATTGTTGATGTAAAGCCTGCAAATATGGAGGATCTGACTGAGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAGTACATTGGCATATAGCAGTTCAAAGGGTTCAATTCGTCTTGTTGACTTGCGGCAGTCAGCATTATGTGATTCTCATGCTAAACTATTTGAGGAACAGGAAGCCCCTGGGTCCAGATCATTTTTCACAGAGATTATTGCTTCAATCTCAGACATAAAATTTGGGAAGGATGGAAGATATATACTCAGTCGTGATTACATGACCTTAAAGTTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACATTCCAGGTTCACGAGTATTTAAGGCCAAAGCTTTGTGATTTATATGAAAATGATTCAATTTTTGATAAGTTTGAGTGTTGTCTAAGTGGTGATGGATTGCGTGTATCAACTGGCTCTTACAGCAATCTATTCCGTGTGTTTGGTTGTGTTCCTGGAAGTACTGAGGCTACGACTTTGGAAGCCAGTAAAAATCCAATGAGACGCCAAGTTCCAACCCCTTCAAGGCCATCTAGATCACTGGGAAACAGTATAACAAGAGCTGTTAGACGTGGAGCAGAAAGTGCCGGTGTCGATGCAAACGGGAATTCTTTTGATTTCACCACTAAGTTGCTGCACTTAGCATGGCACCCAAGTGAGAATTCAATTGCTTGTGCTGCTGCAAATAGCTTATACATGTACTATGCTTGA 1551 0.4101 MNGGDEVMAAPAGPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDHRGSRRDLERMDYSIGRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVSDMNVDPKAMGNGSIASSSNSSSSRSYLANGVSPDGPYNYLNNDFSFPPGGIPSLRLPLVVVTSHETSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCSTLAYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVSTGSYSNLFRVFGCVPGSTEATTLEASKNPMRRQVPTPSRPSRSLGNSITRAVRRGAESAGVDANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0281 516 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 105 119 IPR018067 -
Aed2g0281 516 SMART WD40_4 333 371 IPR001680 GO:0005515
Aed2g0281 516 SMART WD40_4 224 263 IPR001680 GO:0005515
Aed2g0281 516 SMART WD40_4 105 145 IPR001680 GO:0005515
Aed2g0281 516 SMART WD40_4 274 314 IPR001680 GO:0005515
Aed2g0281 516 SMART WD40_4 31 66 IPR001680 GO:0005515
Aed2g0281 516 MobiDBLite consensus disorder prediction 165 182 - -
Aed2g0281 516 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 45 65 IPR000009 GO:0000159|GO:0019888
Aed2g0281 516 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 92 120 IPR000009 GO:0000159|GO:0019888
Aed2g0281 516 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 348 375 IPR000009 GO:0000159|GO:0019888
Aed2g0281 516 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 235 262 IPR000009 GO:0000159|GO:0019888
Aed2g0281 516 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 291 319 IPR000009 GO:0000159|GO:0019888
Aed2g0281 516 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 485 514 IPR000009 GO:0000159|GO:0019888
Aed2g0281 516 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 376 401 IPR000009 GO:0000159|GO:0019888
Aed2g0281 516 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 402 428 IPR000009 GO:0000159|GO:0019888
Aed2g0281 516 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 121 149 IPR000009 GO:0000159|GO:0019888
Aed2g0281 516 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 263 290 IPR000009 GO:0000159|GO:0019888
Aed2g0281 516 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 320 347 IPR000009 GO:0000159|GO:0019888
Aed2g0281 516 MobiDBLite consensus disorder prediction 444 464 - -
Aed2g0281 516 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 3 516 - -
Aed2g0281 516 Gene3D - 36 206 IPR015943 GO:0005515
Aed2g0281 516 Gene3D - 220 322 IPR015943 GO:0005515
Aed2g0281 516 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 3 516 IPR000009 GO:0000159|GO:0019888
Aed2g0281 516 Gene3D - 323 512 IPR015943 GO:0005515
Aed2g0281 516 PIRSF PPA2_B55 10 516 IPR000009 GO:0000159|GO:0019888
Aed2g0281 516 Pfam WD domain, G-beta repeat 227 263 IPR001680 GO:0005515
Aed2g0281 516 SUPERFAMILY WD40 repeat-like 39 508 IPR036322 GO:0005515
Aed2g0281 516 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 233 247 IPR018067 -
Aed2g0281 516 MobiDBLite consensus disorder prediction 158 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0281 Aed-Chr2 1825808 1834133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0281 K04354 - gmx:100789058 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0281 2 1825808 1834133 Aed1g1381 1 12752815 12759161 ECH
Aed2g0281 2 1825808 1834133 Aed2g0281 2 1825808 1834133 ECH
Aed1g1381 1 12752815 12759161 Aed2g0281 2 1825808 1834133 PCT