Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0262 ATGAATTTCTTCAACTGCGTTCATTTGTTCTTCGTGGTTTTTCATGTCTTTGCTGCAACACCAACATCCCACTTTTTCTCATTAGCAGATTCCTCCACACAACTCCCCACCAACTTTCTAGATGCTGCCAAAAAGCCTGAGGTATTCGATTGGATGGTCAGAATCAGAAGGAAGATTCACGAGAATCCAGAATTGGGTTATGAGGAATTTGAGACAAGTAAACTGATTAGAGAGGAATTGGATAAACTGGGTATCCCTCATAAACACCCAGTTGCAATCACTGGTGTTATTGGCTTCATTGGGACTGGAACATCGCCTTTTGAACTGGTGGAGTGGGAGCACAAGAGTAAAGTACCAGGAAAGATGCATGCTTGTGGTCATGATGCTCATGTGACCATGCTTCTTGGTGCTGCAAAGATTCTCAAACAGCATGAAAAGGAGATACTGGGAACTATAGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGTGGAGGGGCTAAAAAAATTTTAGATGCTGGAGCCTTAGAAAATGTTGCAGCTATTTTTGGATTGCATGTGACACCTAACTTTCCAATAGGTGAAGTGGCCTCTAGGTCTGGTCCATTATTGGCAGGAAGTGGTTTCTTTGAAGCAATAATAAGTGGAAAAGGAGGTCATGCAGCTATTCCTCAACAATCTATAGACCCAATATTGGCAACTTCTAATGTTATAGTTAGCTTACAGCATCTTGTTTCCCGTGAGGCTGATCCTCTGGATTCCCAGGTTGTGACTGTAGGAAAATTCCAAGGAGGTAATGCATTCAATGTGATTCCAGATTCTGTCACAATTGGAGGCACCTTCCGAGCTTTTTCAAAAGAAAGCTTCCAGCAATTAAGACGACGCATTGAGCAGGTTGTGATCGCACAAGCTGCTGTGCTGAGGTGCAATGCAACGGTGAACTTCTTTGAAGACGAAAAGCCTTTCTTTCCTGCAACTGTAAACAACGGTGACTTGCACGACCATTTTCGGAGCGTTGCAGGGAATTTGCCCGGCATCAACAAAGTTAATGACATGCCACCATTGATGGGAGCTGAGGACTTTTCATTCTATCAAGAGGTTATGCCTGGCTACTTTTTCTTTATTGGAATACAGAATCCCTCACATGAAAAACTGGAGCAAGTACACTCACCCTATTTCAAGATCAATGAAGATGTGCTTCCTTATGGGGCTGCACTTCATGCCTCCTTAGCTGTTAGCTATCTTCTCAAACATCCGCAGGATGTGCCCTCTGCAGAGGGGAAACATCATGATGAATTGTAA 1299 0.4342 MNFFNCVHLFFVVFHVFAATPTSHFFSLADSSTQLPTNFLDAAKKPEVFDWMVRIRRKIHENPELGYEEFETSKLIREELDKLGIPHKHPVAITGVIGFIGTGTSPFELVEWEHKSKVPGKMHACGHDAHVTMLLGAAKILKQHEKEILGTIVLVFQPAEEGGGGAKKILDAGALENVAAIFGLHVTPNFPIGEVASRSGPLLAGSGFFEAIISGKGGHAAIPQQSIDPILATSNVIVSLQHLVSREADPLDSQVVTVGKFQGGNAFNVIPDSVTIGGTFRAFSKESFQQLRRRIEQVVIAQAAVLRCNATVNFFEDEKPFFPATVNNGDLHDHFRSVAGNLPGINKVNDMPPLMGAEDFSFYQEVMPGYFFFIGIQNPSHEKLEQVHSPYFKINEDVLPYGAALHASLAVSYLLKHPQDVPSAEGKHHDEL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0262 432 CDD M20_IAA_Hyd 52 414 IPR044757 GO:0009850|GO:0016787
Aed2g0262 432 Pfam Peptidase family M20/M25/M40 111 410 IPR002933 GO:0016787
Aed2g0262 432 Pfam Peptidase dimerisation domain 205 302 IPR011650 -
Aed2g0262 432 SUPERFAMILY Zn-dependent exopeptidases 47 416 - -
Aed2g0262 432 Gene3D Zn peptidases 52 399 - -
Aed2g0262 432 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 432 IPR017439 GO:0016787
Aed2g0262 432 SUPERFAMILY Bacterial exopeptidase dimerisation domain 205 314 IPR036264 -
Aed2g0262 432 Gene3D - 204 322 - -
Aed2g0262 432 TIGRFAM amidohydrolases: amidohydrolase 52 401 IPR017439 GO:0016787
Aed2g0262 432 PANTHER AUXIN CONJUGATE HYDROLASE 1 432 - -
Aed2g0262 432 PIRSF Amidohydrol_AmhX 39 418 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0262 Aed-Chr2 1707393 1710604 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0262 K21604 K14664 gmx:100789077 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0262 2 1707393 1710604 Aed2g0262 2 1707393 1710604 ECH
Aed1g1388 1 12778959 12787711 Aed2g0262 2 1707393 1710604 PCT