Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0244 ATGCTTTCCTTCTCTGTTTCTGGTTTCCCTCCATTATCAGTCCGTAGGGCATATCCAAGAGTAAGTGCAAGCTTTGGCATTAGCACTCCACAAGAGCCCAATTCAGCCAACCCTAATGGTTCGGATGCTAAATTTGAAGAAGAAATTCGAAAGGGAAAGGAGAGAGGGAGTGGGATTGTTTTTGGGAGGAAGAAGAAGAAGGCGAAGGAGAAAGTTGAATGGGTTTGCAGCAATTGTGGGTACAGTGCAGGGCAATGGTGGGGTGTGTGCCGATCATGCAATGTATCTGGCACTATGAAAGCGGTCAAATTCAGTGATGATGATGATACTATGGTTAGTGGCTTTTCAGTTTTGGAGGATGCTGTTGTGGGCTCTTGGCTACCGCAACAGGAAGGTGAGATGCGTCCCTTGAGATTGGCTGAGGTTAACAGAGGACTTGACCATCATCATTGGAGAATTCCTTTGTCTAGTCCATTTGGAGATGAAGTTTCCAGAGTGCTTGGTGGTGGTCTTGTACCAGGCTCATTGACTTTAGTTGGTGGTGATCCTGGTGTTGGGAAGAGTACTTTGTTGTTGCAGATAGCTGCAATTATTGCAGGACACAATGATGGCAAAGCATCTCCAGTTGTATATGTCTCTGGTGAAGAGAGTGTTGAGCAAATTGGTAACAGAGCAGATCGCCTTAGGATTGAATCTGATATCTATTTATATTCAAGTAATGATGTTGAGGACATACTGAAGAAAGTTCAGTCTCTCTCCCCTGGGGCTCTTATTGTTGATTCAATACAAACTGTTTATTTAAAAGGAATAATGGGAAGTCCTGGAGGGGTTATGCAGGTGAAAGAATGTAGTTCAGCTTTTCTGCGATTTGCAAAGAAGACGAACATCCCAGTTCTTTTGATTGGACATGTGACAAAATCTGGAGACATTGCAGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTTTTGTATATGGAAGGCGAGAAGTCCTCTTCTCATCGTATGCTTCGAGCTGTGAAAAATCGATTTGGATCTGCTGATGAGCTTGGGGTTTTTGAGATGTCACATTCAGGACTTCAGGCTGTTTTAAATGCCAGTGAAATGTTTCTCAGTGAGCAGTACCTGGATTCAGAAAAATTAGCTGGACTAGCTGTTGCTGTAGTCATGGATGGGTCCCGGACATTCCTTATTGAAATTCAGGCACTTTGTCTTTCTGGTTCAACAGGTTCAAGGCAAGTTAATGGGATCCAACTAAAAAGAGCTGATATGATCATATCTGTTCTTATAAAGCAAGCAGGTCTTCGTCTCCAAGAACATGCTGTATTTTTGAATGTTGTTAGTGGATTGGCACTGACTGAGCCTGCAGGAGATCTTGCTATAGCAGCAGCAATTTGCAGCAGTTGCTTGGAAATCCCTATTCCAAATGACATTGCATTCATTGGTGAAGTTGGACTTGGTGGTGAGCTTCGCATGGTTCCTAGAATGGAGAAAAGGGTATATACCGTTGCGAAATTGGGTTACAGAATGTGTATAGTGCCCAAGGTGGCTGAAAAAGCTTTGGGAACCGAAGGTTTTGAAAAGATGAAAGTTGTTGGTTGCAGGAATCTGAAAGAGGTTATTAACACTGTATTCCTCAATATAATGAGGAGTTAG 1656 0.43 MLSFSVSGFPPLSVRRAYPRVSASFGISTPQEPNSANPNGSDAKFEEEIRKGKERGSGIVFGRKKKKAKEKVEWVCSNCGYSAGQWWGVCRSCNVSGTMKAVKFSDDDDTMVSGFSVLEDAVVGSWLPQQEGEMRPLRLAEVNRGLDHHHWRIPLSSPFGDEVSRVLGGGLVPGSLTLVGGDPGVGKSTLLLQIAAIIAGHNDGKASPVVYVSGEESVEQIGNRADRLRIESDIYLYSSNDVEDILKKVQSLSPGALIVDSIQTVYLKGIMGSPGGVMQVKECSSAFLRFAKKTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKSSSHRMLRAVKNRFGSADELGVFEMSHSGLQAVLNASEMFLSEQYLDSEKLAGLAVAVVMDGSRTFLIEIQALCLSGSTGSRQVNGIQLKRADMIISVLIKQAGLRLQEHAVFLNVVSGLALTEPAGDLAIAAAICSSCLEIPIPNDIAFIGEVGLGGELRMVPRMEKRVYTVAKLGYRMCIVPKVAEKALGTEGFEKMKVVGCRNLKEVINTVFLNIMRS 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0244 551 Pfam Subunit ChlI of Mg-chelatase 421 515 - -
Aed2g0244 551 SUPERFAMILY Ribosomal protein S5 domain 2-like 341 544 IPR020568 -
Aed2g0244 551 PANTHER DNA REPAIR-LIKE PROTEINRADA 42 545 - -
Aed2g0244 551 TIGRFAM sms: DNA repair protein RadA 68 540 IPR004504 GO:0003684|GO:0005524|GO:0006281
Aed2g0244 551 PRINTS DNA repair protein radA signature 260 284 - -
Aed2g0244 551 PRINTS DNA repair protein radA signature 76 100 - -
Aed2g0244 551 PRINTS DNA repair protein radA signature 165 193 - -
Aed2g0244 551 PRINTS DNA repair protein radA signature 334 360 - -
Aed2g0244 551 PRINTS DNA repair protein radA signature 409 432 - -
Aed2g0244 551 PRINTS DNA repair protein radA signature 299 327 - -
Aed2g0244 551 SMART AAA_5 173 330 IPR003593 -
Aed2g0244 551 Gene3D - 152 361 IPR027417 -
Aed2g0244 551 Gene3D - 380 550 IPR014721 -
Aed2g0244 551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 355 IPR027417 -
Aed2g0244 551 Pfam Rubredoxin metal binding domain 74 100 IPR041166 -
Aed2g0244 551 ProSiteProfiles RecA family profile 1. 152 304 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Aed2g0244 551 Pfam AAA domain 166 308 - -
Aed2g0244 551 PANTHER DNA REPAIR PROTEIN RADA 42 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0244 Aed-Chr2 1621952 1627841 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0244 K04485 - gmx:100794165 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0244 2 1621952 1627841 Aed2g0244 2 1621952 1627841 ECH
Aed1g1397 1 12855391 12862991 Aed2g0244 2 1621952 1627841 PCT