Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0169 ATGGAGTTGATTTCGGGTTTACCAGAGGACGTAGCACGAGACTGTCTCATTCGGGTTTCGTATCAGCAGTTCCCCACGGTGGCATCGGTCTGTAAACTCTGGAAATCGGAGATTCAGGCGCCGGACTTCCACCGTCAACGGCGTAGAACAAACCACGCTCAGAAGGTCATAGCGATGGTTCAAGCGCGGCTCGAACCGGGAACGGGTTCGACCAAGCGCGTTACGAACCCGGTTTATCGACTAAGTGTGTTCGAACCTGAAACGGGTAACTGGACCGAGGTGGCAACACCGCCCGAGTTTTGTTCGGGGCTTCCCATGTTCTGCCAGTTAGTCAGTGTCGGGTACGATCTGGTGGTGTTGGGTGGGTTGGACCCGAATTCATGGAAAGCATCAAATTCAGTGTTTGTGTATAATTTCTTGTCGGCGAAGTGGCGCCGCGGGGCGGACATGCCGGGTGGGCCCCGCACGTTCTTCGCGTGCGCATCGGATTCCGAGGGGACAGTTTTTGTCGCCGGCGGACACGACAACGAGAAGAACGCGCTGCGGTCGGCGCTTGCCTATGATGTTACCTCGGACCAGTGGGTCACGCTTCCTGACATGGCGGCGGAGCGCGACGAGTGCAAGGGCGTTTTCCGCGGCGGGAGGTTCGTGGCCATCGGGGGTTACCCGACTGAGTCGCAGGGAAGGTTCGTGAAGAGTGCGGAGGCGTTCGATCCCGCCACGTGGTGTTGGAGCGAAGTGAAGGAGGACTTTTTGGATTGCGCCACGTGTCCGAGGACATTCGTGGGCGATGGCGAGGGAGTGTTCTTGTGCAGCGGCGGGGACTTGATGGCCCTGCGCGGTGACACATGGCAGAAGATGGCGACCTTGCCGGGGGAGATTCGCAACGTGGCGTACGTTGGAGCGTTTGATGGAACGCTGGTGTTGATTGGATCAAGCGGCTACGGTGAAGTTCACGAGGCTTTTGAGTTCGATGTAAAGAGTTGCAATTGGAGAAAACTGGAGAGCCCAGATGGTTTCAGTGGCCATGTCCAAACCGGTTGTGTTTTGGAGATTTAG 1059 0.5732 MELISGLPEDVARDCLIRVSYQQFPTVASVCKLWKSEIQAPDFHRQRRRTNHAQKVIAMVQARLEPGTGSTKRVTNPVYRLSVFEPETGNWTEVATPPEFCSGLPMFCQLVSVGYDLVVLGGLDPNSWKASNSVFVYNFLSAKWRRGADMPGGPRTFFACASDSEGTVFVAGGHDNEKNALRSALAYDVTSDQWVTLPDMAAERDECKGVFRGGRFVAIGGYPTESQGRFVKSAEAFDPATWCWSEVKEDFLDCATCPRTFVGDGEGVFLCSGGDLMALRGDTWQKMATLPGEIRNVAYVGAFDGTLVLIGSSGYGEVHEAFEFDVKSCNWRKLESPDGFSGHVQTGCVLEI 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0169 352 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 352 - -
Aed2g0169 352 Pfam Kelch motif 105 155 - -
Aed2g0169 352 SMART kelc_smart 116 164 IPR006652 GO:0005515
Aed2g0169 352 SMART kelc_smart 167 214 IPR006652 GO:0005515
Aed2g0169 352 SUPERFAMILY F-box domain 3 58 IPR036047 GO:0005515
Aed2g0169 352 Gene3D - 44 342 IPR015915 GO:0005515
Aed2g0169 352 Pfam F-box domain 4 45 IPR001810 GO:0005515
Aed2g0169 352 Pfam Kelch motif 165 200 IPR006652 GO:0005515
Aed2g0169 352 PANTHER OS02G0208700 PROTEIN 1 352 IPR044595 GO:0080037|GO:2000762
Aed2g0169 352 SUPERFAMILY Kelch motif 76 335 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0169 Aed-Chr2 1152125 1153183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0169 7 209 Miscellaneous Gene Families AT4G33900 25.110 4.65e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0169 - - gmx:100796602 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0169 2 1152125 1153183 Aed2g0169 2 1152125 1153183 ECH
Aed1g1466 1 13283032 13284105 Aed2g0169 2 1152125 1153183 PCT