Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1466 ATGGACTTGATTTCTGGTCTACCAGAGGACGTTGCCCGAGACTGCTTGATTCGTGTTCCGTATGACCTATTCCCGGCGGTTGCCTCCGTCTGTAAAGGCTGGAACACGGAGATTCACTCCCCGGACTTTCACCGTCGGAGGAGAACCACGAAACACACACAGAAAATCCTCGTCACGGTTCAATCCAAGATTGACTCCGAAAAAACCCGAACAGGATTGCTCGCTAAGTCCACCGCGAACCCGCTTTACCGGCTCAGTGTATACGAACCGGAAACGGGTTCATGGAGCGAGTTACCCTTAGGACCCGAACTCGCTTTCGGGTTACCCATGTTCTGTCAGATAGCGGGTGTCGGATTCGACCTTGTCGTAATGGGCGGGTGGGACCCGGATTCGTGGAAAGCATCGAATTCCGTTTTCATCTACAACTTCCTGTCGGCCAAGTGGCGCCGTGGGGCCGACATGCCTGGTGGGCCCCGTACCTTTTTCGCATGCGCGTCGGATCAGAATCGCACGGTGTACGTCGCAGGCGGACATGACGAGGAGAAGAACGCGCTGAGGTCAGCGCTTGCGTATGACGTGGCCAGAGACGCGTGGGTCCCGCTCCCCGACATGTCCCGTGAGCGAGACGAGTGCAAGGCCGTGTTCCGCCGAGGCACTCTCTGCGTCGTCGGAGGGTACTGCACCGAGATGCAGGGGCGGTTCGAGCGGAGCGCGGAGGTATTCGACGTTGCCACGTGGAAGTGGGGCACAGTGGAGGAAGAGTTCTTGGATGCGGCCTCGTGCCCGCGCACGTGTGTGGACGCGGCGGAGGGGAGAATGTACATGTGCCGGGGAGGTGACGTGGTGGCACTGCATGGGGACACGTGGCGGAAGGTGGCGAAGGTGCCGAGCGAGATACGGAACATAGCTTGCGTGGGAGTGTGGGAAGGGGTGATAATGGTAATTGGATCGAGTGGGTTTGGGGAACCACACATGAGTTTTCTCTTGGATCTCAAAAATCGGACTTGGACTAAACTCCTCAGCCCAGAAGACTACACTGGTCACGTCCAATCTGGTTGCCTTTTGGATATTTAG 1074 0.5754 MDLISGLPEDVARDCLIRVPYDLFPAVASVCKGWNTEIHSPDFHRRRRTTKHTQKILVTVQSKIDSEKTRTGLLAKSTANPLYRLSVYEPETGSWSELPLGPELAFGLPMFCQIAGVGFDLVVMGGWDPDSWKASNSVFIYNFLSAKWRRGADMPGGPRTFFACASDQNRTVYVAGGHDEEKNALRSALAYDVARDAWVPLPDMSRERDECKAVFRRGTLCVVGGYCTEMQGRFERSAEVFDVATWKWGTVEEEFLDAASCPRTCVDAAEGRMYMCRGGDVVALHGDTWRKVAKVPSEIRNIACVGVWEGVIMVIGSSGFGEPHMSFLLDLKNRTWTKLLSPEDYTGHVQSGCLLDI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1466 357 Pfam F-box domain 4 45 IPR001810 GO:0005515
Aed1g1466 357 PANTHER OS02G0208700 PROTEIN 1 357 IPR044595 GO:0080037|GO:2000762
Aed1g1466 357 SMART kelc_smart 120 168 IPR006652 GO:0005515
Aed1g1466 357 SMART kelc_smart 171 218 IPR006652 GO:0005515
Aed1g1466 357 SUPERFAMILY F-box domain 1 55 IPR036047 GO:0005515
Aed1g1466 357 SUPERFAMILY Kelch motif 78 339 IPR015915 GO:0005515
Aed1g1466 357 Pfam Kelch motif 159 205 IPR006652 GO:0005515
Aed1g1466 357 Pfam Kelch motif 121 155 IPR006652 GO:0005515
Aed1g1466 357 Gene3D - 44 348 IPR015915 GO:0005515
Aed1g1466 357 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1466 Aed-Chr1 13283032 13284105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1466 - - gmx:100786398 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1466 1 13283032 13284105 Aed2g0169 2 1152125 1153183 PCT