Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0168 ATGGGCGCTTCTCTGCCTCCCAAGGAGGCCAACCTCTTCAAGCTTATTGTCAAATCATATGAAACCAAACAATACAAAAAGGGCCTCAAAGCAGCTGATGCCATTTTGAAAAAATTTCCAGATCATGGAGTTTTGATTTTTGTTCTGGTACAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTATGGTCTCCTTTATCGATCAGACAGAGAATACAGGGAGGCGATCAAGTGCTATCGAAATGCACTGAAAATAGATCCTGACAATATTGAAATTCTTCGTGACCTATCGCTCCTACAGGCACAAATGCGAGATTTGACAGGCTTTGTTGAGACAAGACAACAACTTTTGACTTTGAAGCCAAATCATCGCATGAACTGGATTGGATTTTCTGTTGCCCATCATTTGAACTCTAATGCATCCAAAGCAGTTGAAATTTTGGAAGCATATGAAGGGACTTTGGAAGAGGATTATCCTCCAGAAAACGAACGGTGTGAACATGGGGAAATGCTTTTATACAAGGTCTCGTTGTTAGAGGAATGCGGGTTTCTTGAGAGAGCTCTGGAGGAGATGCACAAAAAAGAATTTAAAATTGTTGATAAGCTTGCATACAAAGAACAAGAGGTTTCACTTTTAGTCAATCTTGGTCACTTAGAAGAAGGCAAAGCTTTATACTGGGCATTACTTTCCATGAATCCTGATAATTATAGTTACTATGAAGGTCTCCAAAAGTGTGTTGGATTATATTTAGAAGATGGCCAGTACTCTCCTGATCAAATAGATCGGTTAGATTCATTGTACAAAACACTTGTACAACAATATAAGTGGTCTTCTGCTGTTAAGGGAGTTCCATCTCTGTTCTCTGATCTATCATCTTTGTACAATCATCCCGGGAAGGCAGACATTTTGGAACAACTTATTCTTGACTTAGAGCATTCAATTAGGCTGTCAGGCCAATATCCTGGAAGGCGAGGCCAATACGAAATTGCTCTTTCTAAAATCGATGAAGCTATAGAACATACACCGACAGTCATTGATTTATATTCTGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGTTGCTGCTGCTGCATTTGCAGATGAAGCTAGGTGTATGGATCTTGCTGATCGTTATGTTAATAGTGAATGTGTTAAGCGCATGCTGCAGGCTGACCAGGTGGCTTTGGCTGAAAAAACTGCTGTATTGTTCACAAAAGATGGGGATCAACATAATAACCTTCATGACATGCAGTGCATGTGGTATGAGCTTGCCTCAGGTGAGAGCTATTTCCGCCAGGGTGATCTTGGACGGGCGCTCAAGAAATTCTTAGCAGTGGAGAAGCATTATGCCGATATTACTGAAGATCAATTTGATTTTCATTCATACTGCTTACGGAAAATGACTTTGCGTACTTATGTGGAAATGCTTAAATTTCAAGACCAATTGCACTCACATGCATATTTTCATAAAGCAGCAGCTGGTGCTATCAGATGCTACATTAAGTTGCATGATTTTCCCCCAAAGTCTACATCTCAGGAGGATGATAACATGTCAAAGTTGCTTCCTTCTCAGAAGAAGAAAATGAGACAAAAGCAGAGAAAGGCAGAAGCAAGAGCCAAAAAAGAGGCAGAAGAAAAGAATGAAGAGTCAAGTGCCAGTGGGGTATCGAAGTCTGGGAAGCGGCACGTAAAACCTGTTGATCCTGATCCAAACGGGGAGAAGTTGTTGCAGGTTGAAGATCCACTGTCAGAAGCTACTAAATACTTGAAGTTGCTGCAGAAGAATTCCCCTGATTCATTGGAGACACACTTGCTCTCTTTTGAATTATATACAAGGAAACAAAAGATTTTGCTTGCCTTCCAGGCTGTAAAGCAGTTGCTGAGATTGGATGCTGAACACCCTGATTCTCATCGTTGCTTGATTAAATTCTTCCATAAAGTGGGATCCATGGATGCTCCTGTGACTGACAGTGAGAAACTGATTTGGAGTGTCTTAGAGGCTGAGCGACCAGCTATTAGTCAGCTGCATGAGAAATCCCTGTTTGAGGCAAATAACGCTTTCCTTGAAAAACATAAAGATTCTTTGATGCACAGATCAGCTTTTGCAGAAATCTTGCACATTTTAGATTCAAACAGAAAGTCTGAGGCTGTGAAGTTCGTTGAAGAGTCAACAAATAACATTGCGCCAAGAAATGGAGCACTTGGACAAACCATGGAATGGAAACTTAAAGAGTCTGTTGCAGTTCACAAGCTTCTTGGAACAGTTCTTGGTGATCAGGATGCTGCATTGAGATGGAAGGTGAGTTGTGCAGAGTACTTCCCATATTCTACGTACTTTGGGGGATGCCACAGCTCTGCCTCTCCCAACTCGGCCTTCAATAAGTTACGTAAGAACTCTGAAAATGAGAGTCTTCACCATTCAGAGAGGGATCAAAATGTGGGCTCCATCACATCAAACGGGAAACTAGAGGCATTTAACGATCTCACTATCTGA 2502 0.4133 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGVLIFVLVQNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKPNHRMNWIGFSVAHHLNSNASKAVEILEAYEGTLEEDYPPENERCEHGEMLLYKVSLLEECGFLERALEEMHKKEFKIVDKLAYKEQEVSLLVNLGHLEEGKALYWALLSMNPDNYSYYEGLQKCVGLYLEDGQYSPDQIDRLDSLYKTLVQQYKWSSAVKGVPSLFSDLSSLYNHPGKADILEQLILDLEHSIRLSGQYPGRRGQYEIALSKIDEAIEHTPTVIDLYSVKSRILKHAGDLVAAAAFADEARCMDLADRYVNSECVKRMLQADQVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLKFQDQLHSHAYFHKAAAGAIRCYIKLHDFPPKSTSQEDDNMSKLLPSQKKKMRQKQRKAEARAKKEAEEKNEESSASGVSKSGKRHVKPVDPDPNGEKLLQVEDPLSEATKYLKLLQKNSPDSLETHLLSFELYTRKQKILLAFQAVKQLLRLDAEHPDSHRCLIKFFHKVGSMDAPVTDSEKLIWSVLEAERPAISQLHEKSLFEANNAFLEKHKDSLMHRSAFAEILHILDSNRKSEAVKFVEESTNNIAPRNGALGQTMEWKLKESVAVHKLLGTVLGDQDAALRWKVSCAEYFPYSTYFGGCHSSASPNSAFNKLRKNSENESLHHSERDQNVGSITSNGKLEAFNDLTI 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0168 833 Gene3D - 437 657 - -
Aed2g0168 833 SUPERFAMILY TPR-like 324 654 IPR011990 GO:0005515
Aed2g0168 833 PANTHER BNAC02G23120D PROTEIN 282 813 - -
Aed2g0168 833 MobiDBLite consensus disorder prediction 538 554 - -
Aed2g0168 833 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 282 - -
Aed2g0168 833 MobiDBLite consensus disorder prediction 799 819 - -
Aed2g0168 833 SUPERFAMILY TPR-like 20 148 IPR011990 GO:0005515
Aed2g0168 833 PIRSF NAT_A 281 750 IPR021183 -
Aed2g0168 833 PIRSF NAT_A 1 283 IPR021183 -
Aed2g0168 833 PANTHER BNAC02G23120D PROTEIN 10 282 - -
Aed2g0168 833 Pfam N-terminal acetyltransferase A, auxiliary subunit 167 282 IPR021183 -
Aed2g0168 833 Pfam N-terminal acetyltransferase A, auxiliary subunit 320 628 IPR021183 -
Aed2g0168 833 Coils Coil 528 552 - -
Aed2g0168 833 SMART tpr_5 57 90 IPR019734 GO:0005515
Aed2g0168 833 MobiDBLite consensus disorder prediction 511 578 - -
Aed2g0168 833 ProSiteProfiles TPR repeat profile. 57 90 IPR019734 GO:0005515
Aed2g0168 833 Pfam TPR repeat 64 103 - -
Aed2g0168 833 Gene3D - 2 280 - -
Aed2g0168 833 Gene3D - 281 435 - -
Aed2g0168 833 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 282 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0168 Aed-Chr2 1129357 1142592 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0168 K20792 - gmx:100793968 1482.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0168 2 1129357 1142592 Aed2g0168 2 1129357 1142592 ECH
Aed1g1469 1 13300361 13311264 Aed2g0168 2 1129357 1142592 PCT