Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1469 ATGGGTGCTTCTCTTCCTCCTAAAGAGGCCAACCTCTTCAAGCTTATTGTTAAATCCTATGAAACCAAACAATACAAAAAGGGTCTCAAAGCAGCCGATGCCATTTTGAAAAAATTCCCTGACCATGGAGAAACTTTATCAATGAAGGGTTTGACATTAAATTGCATGGATCGTAAGTCCGAGGCATACGAACTGGTTCGCCAAGGATTGAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTATGGTCTTCTGTATCGGTCAGACAGAGAATACAGGGAAGCAATAAAGTGTTATCGGAATGCACTGAAAATAGATCCTGACAATATTGAAATCTTGCGGGACCTATCACTTTTACAGGCTCAAATGCGAGACTTAATTGGCTTTGTTGAGACACGACAACAACTTCTGACACTCAAATCAAATCATCGCATGAATTGGATTGGCTTTGCTGTTGCACATCATTTGAACTCTAATGCATCAAAGGCTATTGAAATTCTGGAAGCGTATGAAGGGACGTTGGAAGATGATTATCCTCCAGAAAATGAACTGTGTGAGCATGGGGAAATGCTTTTGTATAAGATCTCCATGTTAGAAGAATGTGGAATTTTTCAGAAAGCTCTTGAGGAGTTGCAAAAGAAAGAATTAAAAATTGTTGATAAGCATTCATATAAAGAACAGGAGGTTTCACTTCTAGTTAAGCTTGGCCGCTTAGAAGAAGGGGAGAAATTATATTATGAAGGCCTCCAAATATGCGTCGGATTATATTCAGAAAATGGCCATTATTCTTCTGATGAAATAGATCAGTTAGATGCCTTGTACAAAACACTTGGGCAGCAATATAAGCGGTCTTCTGCTGTTAAGAGAATACCTCTGGATTTTTCACAAGGTGACAAATTTCAAGAAGCCGCAGATAATTATATTAGGCCTCTCCTAACTAAGGGAGTTCCATCTCTTTTCTCTGATCTGTCTTCGTTATACAATCAATCTGGGAAGGCAGACATTTTGGAACAGACCATTCTTGTGATAGAGAATTCAATGAAGACCACTGGTCAATACCCTGGAGGGATGGAAAAAGAGCCACCTTCAACTCTTATGTGGACTTTGTTCTTGTTGGCTCAGCATTATGACAAACGGGGCCAATATGAAATTGCTCTGTCTAAAATCGATGAGGCTATTGATCACACACCTACTGTCATTGATCTGTATTCGGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGTTGCTGCTGCTGCATTTGCAGATGAAGCTAGGTGTATGGATCTTGCTGATCGTTATGTTAATAGTGAATGTGTTAAGCGCATGCTGCAGGCTGATCAGGTGGCTTTGGCAGAAAAAACCGCTGTGTTGTTCACAAAAGATGGTGATCAACACAACAACCTACATGATATGCAGTATGAGCTTGCCTCTGCTGAAAGCTATTTTCGCCAAGGTAATCTTGGAATGGCTCTCAAGAAATTTCTTGCTGTGGAGAAGCATTATGCAGATATTACAGAAGATCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACATTGCGTACATATGTTGAAATGCTTAAATTTCAAGACCAATTGCATTCACATGCATACTTTCATAAAGCAGCCACTGGAGCTATCAGATGTTATATCAAATTGCATGATTCTCCCCCAAAGTCAACAGCCGAGGAAGATAATGACATGTCTAAGTTGCTTCCTTCTCAAAAAAAGAAAATGAGGCAAAAACAGAGAAAGGCAGAAGCAAGAGCTAAGAAAGAGGCAGAAGAAAAAAATGAAGAATCAAGTGCTGGTGGGTTATCAAAGTCTGGGAAACGACATGCAAAACCTGTTGATCTGGATCCACATGGTGAAAAGTTGTTGCAGGTCAAAGATCCTTTGTTGGAAGCCACAAGATACTTGAAGTTGTTGCTGAAGAATTCACCTGATTCGTTGGAGACACACTTTCTCTCTTTTGAATTGTATATGAGAAAACAGAGGATTTTGCTTGCATTCCAGATTAAATTCTTCAATAAAGTGGGATCCATGAATGCTCCTGTGACTGACAGTGAGAAACTCATTTGGAGTGTCTTAGAAGCTGAGCGCCAAACTATTAGTCAGCTGCATGGAAAATCTCTGTTTGAGACAAATAATTCTTTCCTTGAAAAACATGAAGAATCTTTGACGCATAGAGCTGCTTTTGGAGAAATGTTGTATATTTTGGATCCCAACAGAAGGTCTGAGGCTGTCAAGTTGATTGAAGGGTCGGCAAATAATCTTGTACCAAGAAATGGAGTGCTTGGACCGATCAGGGAATGGAAACTTAAAGATTGTATTGCAGTTCATAAACTTCTTGGAACAGTTCTTGTTGATCAGGATGCTGCATTAAGATGGAAAGTTCGTTGTGTTGAGTTTTTCCCATACTCCACCTACTTTGAGGGCAGTTGCAGCTCTGCCTCTCCCAACTCTGCCTTTAATCAGATACGCAAGAGCACTGAAAATGGGAGTTCTAACCATTCAGTGAGTGATCAAAATGCTGCAGAATCAAATGGCAAACTACAGGCATTCAAAGATCTCACTATCTGA 2595 0.3988 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLIGFVETRQQLLTLKSNHRMNWIGFAVAHHLNSNASKAIEILEAYEGTLEDDYPPENELCEHGEMLLYKISMLEECGIFQKALEELQKKELKIVDKHSYKEQEVSLLVKLGRLEEGEKLYYEGLQICVGLYSENGHYSSDEIDQLDALYKTLGQQYKRSSAVKRIPLDFSQGDKFQEAADNYIRPLLTKGVPSLFSDLSSLYNQSGKADILEQTILVIENSMKTTGQYPGGMEKEPPSTLMWTLFLLAQHYDKRGQYEIALSKIDEAIDHTPTVIDLYSVKSRILKHAGDLVAAAAFADEARCMDLADRYVNSECVKRMLQADQVALAEKTAVLFTKDGDQHNNLHDMQYELASAESYFRQGNLGMALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLKFQDQLHSHAYFHKAATGAIRCYIKLHDSPPKSTAEEDNDMSKLLPSQKKKMRQKQRKAEARAKKEAEEKNEESSAGGLSKSGKRHAKPVDLDPHGEKLLQVKDPLLEATRYLKLLLKNSPDSLETHFLSFELYMRKQRILLAFQIKFFNKVGSMNAPVTDSEKLIWSVLEAERQTISQLHGKSLFETNNSFLEKHEESLTHRAAFGEMLYILDPNRRSEAVKLIEGSANNLVPRNGVLGPIREWKLKDCIAVHKLLGTVLVDQDAALRWKVRCVEFFPYSTYFEGSCSSASPNSAFNQIRKSTENGSSNHSVSDQNAAESNGKLQAFKDLTI 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1469 864 PANTHER BNAC02G23120D PROTEIN 10 848 - -
Aed1g1469 864 SUPERFAMILY TPR-like 13 124 IPR011990 GO:0005515
Aed1g1469 864 MobiDBLite consensus disorder prediction 560 626 - -
Aed1g1469 864 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 676 IPR021183 -
Aed1g1469 864 Gene3D - 488 694 - -
Aed1g1469 864 PIRSF NAT_A 1 783 IPR021183 -
Aed1g1469 864 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Aed1g1469 864 MobiDBLite consensus disorder prediction 561 578 - -
Aed1g1469 864 Pfam TPR repeat 84 123 - -
Aed1g1469 864 MobiDBLite consensus disorder prediction 831 850 - -
Aed1g1469 864 Gene3D - 2 487 - -
Aed1g1469 864 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 848 - -
Aed1g1469 864 Coils Coil 580 604 - -
Aed1g1469 864 MobiDBLite consensus disorder prediction 590 606 - -
Aed1g1469 864 SMART tpr_5 77 110 IPR019734 GO:0005515
Aed1g1469 864 SMART tpr_5 43 76 IPR019734 GO:0005515
Aed1g1469 864 SMART tpr_5 367 400 IPR019734 GO:0005515
Aed1g1469 864 SUPERFAMILY TPR-like 233 436 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1469 Aed-Chr1 13300361 13311264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1469 K20792 - gmx:100776968 1516.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1469 1 13300361 13311264 Aed2g0168 2 1129357 1142592 PCT