Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0162 ATGCCTTCTCTCTCGGAGGCCTATAGAGCTCACCCTGTGTACCTTCACCATAAACACCCAGACTTGAACTCGCTTGAAGAACTCCCAGACTCTTACGCTTGGACACAACCCAATGATCATTATCACACATCCAACAAGACAACTAAGAGTAGTAGCGCTGTCCCCGTAATCGATTTCAACGACCCAAATGCTCCAAGCCTAATGGGGCATGCATGCAAAACATGGGGCGTGTTCCAACTGGTTAATCATGGCATCCCCATGAGCCTCTTCAGCGACATTCAGAGGGCTAGTCTTGCTTTGTTCTCCCTTCCCTTTCACCAGAAGCTCAAAGCGGCTCGCTCCCCCGACGGCGTCTCCGGCTACGGCCGCGCTCGCATCTCCTCCTTCTTCCCCAAACTCATGTGGTCTGAGTGCTTCACAATTCTCGATTCCCCTCTTGACCTTTTCCTCAAACTCTGGCCACAAGACTATGCTAAATACTGTGATATTGTCGTGGAATATGAAGCAGCCATGAAAAAGCTAGCGGCGAAGCTAATGTGCCTCATGTTGGCATCCCTTGATATTTCAAAGGAAGACATTAAATGGGCTGGGCCAAGAGGAGAATTCAACGGGTCTTGTGCGGCCTTGCATTTTAATTCTTACCCGAGTTGCCCGGATCCGGATCGGGCAATGGGTCTGGCTGCGCACACGGACTCCACTCTCCTCACAATTCTTCACCAAAACAATGTCAACGGGCTTCAGGTTCACAGGGAAGGGGAAGGTTGGGTGGCAGTGCCGCCACTTCCCGGAGGGCTCGTGATCAACGTCGGCGATCTGCTCCACATTTTGTCAAACGGGTTGTACCCGAGTGTGCTCCATCGGGTTCGGGTGAACCGAACCCGGCATCGGTTCTCGGTTGCTTATCTATATGGGCCCCCAGCAAACGTTCAAATAAGTCCACATGTAAAGTTGGTAGGCCCAACTAGGCCAGCTCTTTATCGATCGTTGACTTGGAACGAGTACCTTGGCACAAAAGCAAAGCATTTTAATAAGGCTCTTTCAGCGGTTAGGCTTTCTGCATCTTTTAACGGTTCGTTTGATGTAAATGAGGATCCGAATAACGACTTTTAA 1110 0.5036 MPSLSEAYRAHPVYLHHKHPDLNSLEELPDSYAWTQPNDHYHTSNKTTKSSSAVPVIDFNDPNAPSLMGHACKTWGVFQLVNHGIPMSLFSDIQRASLALFSLPFHQKLKAARSPDGVSGYGRARISSFFPKLMWSECFTILDSPLDLFLKLWPQDYAKYCDIVVEYEAAMKKLAAKLMCLMLASLDISKEDIKWAGPRGEFNGSCAALHFNSYPSCPDPDRAMGLAAHTDSTLLTILHQNNVNGLQVHREGEGWVAVPPLPGGLVINVGDLLHILSNGLYPSVLHRVRVNRTRHRFSVAYLYGPPANVQISPHVKLVGPTRPALYRSLTWNEYLGTKAKHFNKALSAVRLSASFNGSFDVNEDPNNDF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0162 369 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 204 305 IPR005123 -
Aed2g0162 369 SUPERFAMILY Clavaminate synthase-like 15 342 - -
Aed2g0162 369 Gene3D - 21 345 IPR027443 -
Aed2g0162 369 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 146 IPR026992 -
Aed2g0162 369 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 361 - -
Aed2g0162 369 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 361 - -
Aed2g0162 369 Pfam 2OG-Fe(II) oxygenase superfamily 209 305 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0162 Aed-Chr2 1085036 1087128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0162 46 355 Glycosyltransferase AT5G59530 28.783 2.76e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0162 K04124 - gmx:100794180 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0162 2 1085036 1087128 Aed2g0162 2 1085036 1087128 ECH
Aed1g1475 1 13345507 13348623 Aed2g0162 2 1085036 1087128 PCT