Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1475 ATGCCTTCACTCTCAGAGGCCTATCGAGCCCACCCGGTGCACGTTGAACACAAGCACCCTGACTTAAACACCCTTCAAGAACTCCCCGACTCTTACACTTGGACGACACACGACAGCCTCAACGTCAACAACGACAACGACAGTAGTAGTGTCGTCGTCCCCGTTATTGACCTGAATGATCCAAATGCTTCAAAGTTGATTAACCATGCATGCATAAGTTGGGGAGCGTACCAAGTGGTGAACCATGGCATACCCATGACCCTCCTCGATGACATTCAACGCCTTGGCGAATCCCTCTTCTCTCTCCCTTCTCACCATAAACACAAAGCTGCTCGTTCCCCTGACGCTGTTGATGGCTACGGCCTCGCTCGCATCTCTTCTTTCTTCCCCAAACTCATGTGGTCTGAAGGCTTCACAATTCTTGGATCCCCTCTTCACCATTTTCGCCAACTCTGGCCCCAAGATTACCACAATTACTGTGATATTGTCACGCAATATGATGAAGCCATGAAAAAGCTAGTGGGAAAGCTGATGTGGCTCATGTTGGATTCTCTGGGTATTACAAAGGAAGACCTCAAATGGGCCGGCTCAAAAGGCCAATTAAAAAACACTTGCGCTGCACTGCAATTGAACTCATACCCGACTTGTCCGGATCCGGATCGGGCCATGGGTCTGGCGGCCCACACGGATTCCACCCTCCTCACAATCCTTTACCAAAACAACATAAGCGGGTTGCAGGTTCATCGTAAAGGCAGCGGGTGGGTGACGGTGCCGCCAGTCCCCGGCGGACTTGTGATAAATGTAGGGGACCTGCTCCACATATTGTCAAACGGGTTGTACCCGAGTGTGCTCCATCGGGTCTTAGTGAACCGGGTCCAGCAAAGGCTATCAGTGGCGTATTTATGTGGGCCCCCACCCAATGTGGAGATCTGTCCACACGCGAAGTTGGTGGGTCCAAATAAACCTCCCCTTTATAAGGCAGTGACTTGGAATGAGTATCTTGGTACCAAAGCAAAGCATTTCAACAAGGCACTTTCAACCGTTCGGCTTTGTGCACCTATTAACGGTTTGTTTGATGTAAATGTAAACGAACGAGCCTCACAGAAATAG 1110 0.5018 MPSLSEAYRAHPVHVEHKHPDLNTLQELPDSYTWTTHDSLNVNNDNDSSSVVVPVIDLNDPNASKLINHACISWGAYQVVNHGIPMTLLDDIQRLGESLFSLPSHHKHKAARSPDAVDGYGLARISSFFPKLMWSEGFTILGSPLHHFRQLWPQDYHNYCDIVTQYDEAMKKLVGKLMWLMLDSLGITKEDLKWAGSKGQLKNTCAALQLNSYPTCPDPDRAMGLAAHTDSTLLTILYQNNISGLQVHRKGSGWVTVPPVPGGLVINVGDLLHILSNGLYPSVLHRVLVNRVQQRLSVAYLCGPPPNVEICPHAKLVGPNKPPLYKAVTWNEYLGTKAKHFNKALSTVRLCAPINGLFDVNVNERASQK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1475 369 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 203 304 IPR005123 -
Aed1g1475 369 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 362 - -
Aed1g1475 369 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 153 IPR026992 -
Aed1g1475 369 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 362 - -
Aed1g1475 369 Gene3D - 20 344 IPR027443 -
Aed1g1475 369 Pfam 2OG-Fe(II) oxygenase superfamily 208 304 IPR044861 -
Aed1g1475 369 SUPERFAMILY Clavaminate synthase-like 16 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1475 Aed-Chr1 13345507 13348623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1475 49 345 Glycosyltransferase AT5G59530 30.841 2.35e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1475 K04124 - gmx:100776755 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1475 1 13345507 13348623 Aed1g1475 1 13345507 13348623 ECH
Aed1g1475 1 13345507 13348623 Aed2g0162 2 1085036 1087128 PCT