Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0154 ATGCCCAACACATTGCCTACTTCACCAACCGGTACCTCCTCTACTAGTCTATTTGAGCTTCTCACCGAAATGAAGAAGCAATCCTATCCAGAATCACTCACCTTCCAAGCAAAATCTCCTTCCCAATTCTCCTCCGAATGTTGGTTCGACGATGCATGCATCTTGGACATGGATTACTTTGTCAAGACCCTTTCTGGCATCAAAGCCAAAGGCGTTCGTGCAGACCTTATTGGCTCCATCATCACACACTACGCCTCTAAATGGCTCCCTGACCTCTCTGCAGGTGACATGGCTGAAAAGGGTCTCACCCAATTCGAGGAATCACCTGAAAGCGTGACAGCTTCATGGATGAAGAAGAGGTTCTTCGTGGAAACCTTGGTGGGTGTTCTGCCTCCTGAGAAGGATGCAATTCCATGCAACTTCCTGCTTCGGCTTCTGAGGACGGCCAACATGGTTGGGGTTGAGGTTACCTACAGACAAGAGCTTGAGAAGCGTATTTCGTGGCAGTTGGACCAGGCTTCCTTGAAGGAGTTGGTGATTCCATCTTTTAGCCACACTTGTGGGACTCTCTTGGATGTTGAGCTGGTCATTAGGCTGGTTAAGAGGTTTGTGAGTTTGGACAGTGAGGGAGCTAAGAGCGTTGCCTCTTTGGTTAAGGTGGCTAAGTTGGTTGATTCATACCTTGCTGAGGCTGCTGTGGATGCCAATTTGAGCTTGAACGACTTCGTTACCCTTGCCACAGCTCTTCCAAGCCATGCAAGAGCAACAGACGATGGATTTTACAGAGCCATTGATACTTATCTTAAAGCGCATCCAGGTGTATCGAAGCAAGAAAGGAAGGGTCTGTGCAGGTTAATAGACAGCAGAAAGCTAACAGCAGAGGCGTCACTTCACGCAGCACAAAACGAACGGTTTCCAGTGAGAGCAGTGATTCAGGTGCTACTCTCGGAGCAGAGCAAGCTGATGAACCAGAACCAGAACCGGCATGTGGATTGGAGCGGGTCGTTGGTGAGTGGGAGTGTGACAAGAAGCCCTGGACTTGGAGGAGGGTTCGATTTGCCAACACGGTGTCTTTCGAAGCGTGAGGTGAATGCTCAACAACACGAGATAAGGAGGCTCAAGGATGACGTGTACAGGCTTCAGAGCCAGTGCAGTGCCATGCAGGCTCAGATGGAGAAAATGGTCGACAAGAAGAAAGGCTTCTTCAAGTGGAAGAAGTTTGCTTCTTTTGCCAAAACTACTACTGAGCTGCACGACCACAAAATGGATCAAGAGCTTCAAGGAAATGGAATGTACACTCCTGCGGACCTCAAAACTAGATTGGTGATCAATGCCAAAAGTAGCACTAAGAATACTCATAACAAGTGGAGGAAATCCATGTCATGA 1386 0.4848 MPNTLPTSPTGTSSTSLFELLTEMKKQSYPESLTFQAKSPSQFSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIITHYASKWLPDLSAGDMAEKGLTQFEESPESVTASWMKKRFFVETLVGVLPPEKDAIPCNFLLRLLRTANMVGVEVTYRQELEKRISWQLDQASLKELVIPSFSHTCGTLLDVELVIRLVKRFVSLDSEGAKSVASLVKVAKLVDSYLAEAAVDANLSLNDFVTLATALPSHARATDDGFYRAIDTYLKAHPGVSKQERKGLCRLIDSRKLTAEASLHAAQNERFPVRAVIQVLLSEQSKLMNQNQNRHVDWSGSLVSGSVTRSPGLGGGFDLPTRCLSKREVNAQQHEIRRLKDDVYRLQSQCSAMQAQMEKMVDKKKGFFKWKKFASFAKTTTELHDHKMDQELQGNGMYTPADLKTRLVINAKSSTKNTHNKWRKSMS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0154 461 Coils Coil 363 390 - -
Aed2g0154 461 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 461 - -
Aed2g0154 461 Pfam NPH3 family 47 296 IPR027356 -
Aed2g0154 461 PANTHER OS12G0117600 PROTEIN 2 461 IPR043454 -
Aed2g0154 461 ProSiteProfiles NPH3 domain profile. 46 320 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0154 Aed-Chr2 1049028 1051397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0154 45 321 EF-hand Containing Proteins AT3G44820 36.093 1.41e-51 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0154 - - gmx:100777676 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0154 2 1049028 1051397 Aed2g0154 2 1049028 1051397 ECH
Aed1g1479 1 13387634 13390006 Aed2g0154 2 1049028 1051397 PCT