Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2225 ATGCAAACCCATGTGATCTTCAAAGAACTCATATCCATATCCAAGATAGCTCTCCCCATGATCCTGACCGGTCTCTTGCTCTACTGCCGTTCAATGATCTCCATGCTCTTCCTGGGCAACCTCGGCGAGCTGGCCTTAGCTGGCGGGTCCCTCGCCGTTGGCTTCGCCAACATCACCGGCTACTCGATCCTCTCCGGGCTCGCGGTAGGAATGGAACCCATTTGCGGACAAGCCTACGGTGCCAAAAGGTTCACCCTCCTGGGCCTCTGCTTGCAAAGAACCATTCTTTTGCTCTTCTTGACTTGTATCCCAATCTCTCTCCTTTGGCTGTACATGAAGCATATCCTTCTTTTATGTGGCCAGGACGAGGCCATAGCCACCCAAGCCCAATTGTATCTTCTCTACTCCATCCCTGACCTCTTGACACAATCTTTTTTACACCCTTTGAGAATTTACCTTCGAAGCCAATCCATTACTCTGCCTCTCACACTTTGCGCCACTTTCTCAATTCTCCTTCACATCCCCATTAACTACCTTCTCGTTTCCCACCTCAATTGGGGAATCAAAGGCGTGGCTCTCAGCGGGGTCTGGACTAACCTCAACCTCGTGGCTTCTTTGATTCTCTACATAGTCTTCTCCGGCACGCATAAGAAAACATGGGGAGGATTTTCATTCGAGTGCTTTAGGCAGTGGAAACCGCTCCTCAATTTGGCCATCCCAAGCTGCATTTCCGTGTGCCTCGAATGGTGGTGGTATGAGATCATGATCTTGCTATGTGGGTTGTTGGTGAATCCTAGAGCAACCGTGGCCTCCATGGGGATTTTGATCCAAACCACTTCTTTGCTCTACATTTTCCCATCGTCGATAAGCTTCAGCGTGTCCACGAGAGTTGGCAACAAATTGGGAGCGCAAAAGCCCTCAAAGGCTAAACTCTCTGCAGTAGTTGGCCTCTCTTGCAGCTTCGTGTTGGGTGTTTTAGCTTTGGCTTTCACCGTTCTGGTTAGGAACATTTGGGCCAGCATGTTCACACAGGACAATGAGATAATAACATTGACTTCATTGGTGTTACCGATTATAGGACTTTGCGAACTCGGAAACTGTCCTCAAACAACGGGGTGCGGGGTGCTAAGAGGCACGGCAAGGCCTAAAGTTGGTGCTAACATTAACTTGGGTTGTTTCTACCTTGTGGGAATGCCTGTGGCGGTTTGGCTTGGTTTCTTCGCTGGGTTTGATTTTCAAGGGTTGTGGCTTGGCTTACTTGCGGCTCAGGGGTCTTGTGCAGTCACCATGTTGGTGGTTCTAAGTCGAACGGATTGGGATGCTCAGGCTCTAAGAGCAAATAAACTAACCAGTGTTGTTGTTCATGATGATGAGCCAGCCAAAGCTGAAATCAAGGAAGATTCTTTATTATCATTAGCTGATTCAGATGAAGATAAACAATCATGGGTTTAA 1452 0.4848 MQTHVIFKELISISKIALPMILTGLLLYCRSMISMLFLGNLGELALAGGSLAVGFANITGYSILSGLAVGMEPICGQAYGAKRFTLLGLCLQRTILLLFLTCIPISLLWLYMKHILLLCGQDEAIATQAQLYLLYSIPDLLTQSFLHPLRIYLRSQSITLPLTLCATFSILLHIPINYLLVSHLNWGIKGVALSGVWTNLNLVASLILYIVFSGTHKKTWGGFSFECFRQWKPLLNLAIPSCISVCLEWWWYEIMILLCGLLVNPRATVASMGILIQTTSLLYIFPSSISFSVSTRVGNKLGAQKPSKAKLSAVVGLSCSFVLGVLALAFTVLVRNIWASMFTQDNEIITLTSLVLPIIGLCELGNCPQTTGCGVLRGTARPKVGANINLGCFYLVGMPVAVWLGFFAGFDFQGLWLGLLAAQGSCAVTMLVVLSRTDWDAQALRANKLTSVVVHDDEPAKAEIKEDSLLSLADSDEDKQSWV 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2225 483 CDD MATE_eukaryotic 9 443 IPR045069 GO:0042910|GO:1990961
Aed1g2225 483 PANTHER MULTIDRUG RESISTANCE PROTEIN 3 460 - -
Aed1g2225 483 PANTHER PROTEIN DETOXIFICATION 3 460 - -
Aed1g2225 483 Pfam MatE 240 403 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g2225 483 Pfam MatE 19 179 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed1g2225 483 TIGRFAM matE: MATE efflux family protein 19 416 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2225 Aed-Chr1 18554975 18556426 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2225 K03327 - gmx:100777255 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2225 1 18554975 18556426 Aed11g1693 11 20625393 20626961 ECH
Aed1g2225 1 18554975 18556426 Aed1g2225 1 18554975 18556426 ECH