Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1693 ATGTGCCAGTTATCATCATCTCCCAGCAGCTCCACTTTGTTTGAGGGCCATCCAAACAAAATTGATGCCCTTTTGATCCCCAATCCACCAACAACATTCGAACATGTCCAAAAGCCCCATAATACCCATTTTTCCCTTGCCCTCAACGAAATCAAATGCATAGCCAACATAGCACTACCCATGGTACTAACCGGCCTATTACTCTATTCTCGCTCCGTAATCTCCATGCTCTTCCTCGGTCGCGTGGGTAACCTTGCCTTGGCTGGTGGGTCTCTCGCCATTGGTTTCGCCAACATCACAGGTTATTCTATTCTCTCCGGCCTTGCCATGGGCATGGAGCCCATTTGCGCCCAGGCTTTTGGGGCCAAAAGGTTCAAACTTCTGGGCCTTGCCATGCAGAGGACAACCCTCCTCCTTCTTCTAACCTCACTCTTTATTTCATTCTTATGGCTCAACATGAACACAATATTGCTCCTATGTGGTCAACCACAACACATCGCCACTCAAGCTCAATCTTTCATTCTTTATTCTATTCCTGATCTCGTCGCACAATCATTGCTACACCCTTTGAGAATCTACTTGCGAAGTCAATCCATAACCCTGCCTCTCACATATGCTGCATCTCTCTCTATTCTCTTCCATGTCCCCATCAACTACTTCCTCGTCTATGTGCTTAAGCTTGGAATCAGAGGCATTGCCTTAGGAGCTGTTTGGACCAATTTCAACCTCGTCTTTTCCTTGATTCTCTACGTCTGCCTCTCCGGGGTATACAAGAAAACATGGCCCGCTGTTTCGTTGGAGGCTGTCTTCAGTGGATGGAAATCGCTTTTGAATTTGGCAATTCCAAGTTGCATTTCCGTTTGCCTGGAGTGGTGGTGGTACGAAATCATGATTTTACTCTGCGGGTTATTGATTAATCCCCAAGCAACTGTTGCATCAATGGGGGTTCTGATTCAAACCACTGCTTTCATATACATTTTCCCATCTTCCCTAAGCTTTGCTGTTTCCACACGTGTTGGAAATGAGCTGGGTGCGGAGAATCCTAAAAAGGCAAAACTTGCAGCAGTGGTGGGGTTGTGTTTGAGTTACGGTTTGGGATTCTCGGCTCTGTTTTTTGCCGTTTCGGTGAGGCACGTGTGGGCTTCCATGTTCACACGTGACGTGGAGATCATTGCTTTGACCTCGACGGTGTTGCCCATCATTGGGCTCTGCGAGTTGGGAAATTGTCCGCAGACAACGGTTTGCGGCGTTCTGAGGGGAACCGCGAGGCCCAAGTTGGGAGCGAATATAAATTTGGGATGCTTCTATCTGGTGGGAATGCCCATTGCGGTGTGGTTGAGTTTCTTTGCGGGCTTTGATTTCAAAGGCTTGTGGCTTGGTCTATTAGGCGCTCAAGCCTCTTGTATGCTCACCATGTTAATTGTGTTGGCTCGCACCAATTGGCAGGCTCAGGTTCAAAGAGCCGAACAACTCACTTCATCCTCTGAACAACTTGTGCTGGTTCAGCAGGAACCTCAACAAGATCACAATTGTTCCTTATTGACTTCCTGCGCTGATTCATTAGTTTGA 1569 0.4761 MCQLSSSPSSSTLFEGHPNKIDALLIPNPPTTFEHVQKPHNTHFSLALNEIKCIANIALPMVLTGLLLYSRSVISMLFLGRVGNLALAGGSLAIGFANITGYSILSGLAMGMEPICAQAFGAKRFKLLGLAMQRTTLLLLLTSLFISFLWLNMNTILLLCGQPQHIATQAQSFILYSIPDLVAQSLLHPLRIYLRSQSITLPLTYAASLSILFHVPINYFLVYVLKLGIRGIALGAVWTNFNLVFSLILYVCLSGVYKKTWPAVSLEAVFSGWKSLLNLAIPSCISVCLEWWWYEIMILLCGLLINPQATVASMGVLIQTTAFIYIFPSSLSFAVSTRVGNELGAENPKKAKLAAVVGLCLSYGLGFSALFFAVSVRHVWASMFTRDVEIIALTSTVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPIAVWLSFFAGFDFKGLWLGLLGAQASCMLTMLIVLARTNWQAQVQRAEQLTSSSEQLVLVQQEPQQDHNCSLLTSCADSLV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1693 522 PANTHER PROTEIN DETOXIFICATION 32 501 - -
Aed11g1693 522 TIGRFAM matE: MATE efflux family protein 60 458 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed11g1693 522 PANTHER MULTIDRUG RESISTANCE PROTEIN 32 501 - -
Aed11g1693 522 CDD MATE_eukaryotic 50 487 IPR045069 GO:0042910|GO:1990961
Aed11g1693 522 Pfam MatE 282 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed11g1693 522 Pfam MatE 60 220 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1693 Aed-Chr11 20625393 20626961 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1693 K03327 - gmx:100811560 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1693 11 20625393 20626961 Aed11g1693 11 20625393 20626961 ECH
Aed1g2225 1 18554975 18556426 Aed11g1693 11 20625393 20626961 ECH