Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2042 ATGGTTTTGAAGTCAATGGTTGCTTCAGCGAGCGATCTAAGCCTCGTGAGTATTGCAGGGAACCCTCCCATCGATTTGAAGAATCGGGTTTTCGGTGGCCGAATCATTAGCTTCGGATTTCGTCTCAACAAAGGTAAATGGAAGGGGAATGAAAGGTTTGACTTTAAGGTTAGTGCAGCTGTGGAAGTGGGTGTGGGTGTGGAGAGATCGAAGAGTAAGGCTGTGGAGGGTGGTTTTGGGTTGGATGTGGTTTCAGAGGCAGAGTTAACAGTGAAGGGCTTTGCGGGGTTGAGAAAGACCAAGCTTGTGTGCACTGTTGGTCCTGCTTGCAGCTCTTTGGAGGATCTTGAGAACATGGCCTTGGGAGGCATGAGTGTTGCCAGGCTCAACATGTGCCATGGGACCAGGGAGTGGCACCGTGATGTGATTAGGAAGATCAAGAAGTTGAATGAGGAGAAAGGGTTCTGTGTTTCTGTGATGATTGACACCGAGGGTAGTCAGGAAGGTTCAAATTGGGTATTTACTGCTGAACATTTTGAGGGTTCTCGCCCATTCACTGTTCAAACGAACTATAGAGGTTTTTCTGAAGGTATTGAAGTGGGTGATGAACTTGTACTTGATGGTGGAATGGCACGCTTTGAAGTCATTGAAAAGACTGGAAATGATTTGCATTGCAAGTGCATAGACGCTGGTCTTTTCCTGCCTGGAGCCAAATTTAGTTTCTGGAGAGATGGAAAGCTTGTGAAGGGGAATAACAAGCTCCCCACTCTATCGTCAAAGGATTGGGCTGACATTGACTTTGGTATAGCAGAGGGTGTGGATTTTTTTGCCTTATCCTTTGTCAATCATGCTGATTCTGTTAAGGATCTAAAGAACTACCTCTCTACGAAGTCAACCAAATCCATAAAAGTTTTGGCAAAGATTGAAAGCTTAGAATCCCTTCATAAACTGGAGGAAATAGTGCGAGCTTCTGATGGAATCATGGTGGCTCGGGGTGACCTTGGGGTCGAAATACCACTTGAACAGATTCCTACAGTCCAAGAGGATATAATTTACGTGTGCAGACAATTAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTTGAGTATCCAACTCCAACACGTGCTGAGGTAGCAGATGTTTCTGAAGCAGTTCGACAGTATGCTGATGCTTTGATGTTGTCTGGTGAGTCAGCTATTGGATCATATGGACGAAAAGCTTTGGCAGTCTTGGATATGACTAGCAGTAGAATGGAATCATGGAGTCGGGAGGAAAACAGACAAAGTCTTCTCAACCACCACCAACTTGGAGCATCATTGCCAGAATGCATAACTGAGCAAATATGCAATTGTGCTGTTGAAATGGCCAACAACCTTGGTGTGGATGCCATCTTTGTGTACACAAAGCATGGACACATGGCATCACTTCTATCACGCAACCGCCCGAATCCTCCCATCTTTGCATTCACCGATGATGATAGCACCCGCATGGCTCTGACTTTGCAATGGGGTGTTGTGCCCCTTCTGGTTGATTTATCAGATGATGCCGAATCCAACATCTCAAAGTCTGTCCAACTTATGAAATCCAGAGGATTGATCAGCCAAGGAGATGTTGTTCTAGTGGTCTCAGATGTTGCTCCAACACGTGCCACTCCTACGGCTTTCCAGTCTATTCAGGTGAAGACTATTATCTAA 1707 0.4552 MVLKSMVASASDLSLVSIAGNPPIDLKNRVFGGRIISFGFRLNKGKWKGNERFDFKVSAAVEVGVGVERSKSKAVEGGFGLDVVSEAELTVKGFAGLRKTKLVCTVGPACSSLEDLENMALGGMSVARLNMCHGTREWHRDVIRKIKKLNEEKGFCVSVMIDTEGSQEGSNWVFTAEHFEGSRPFTVQTNYRGFSEGIEVGDELVLDGGMARFEVIEKTGNDLHCKCIDAGLFLPGAKFSFWRDGKLVKGNNKLPTLSSKDWADIDFGIAEGVDFFALSFVNHADSVKDLKNYLSTKSTKSIKVLAKIESLESLHKLEEIVRASDGIMVARGDLGVEIPLEQIPTVQEDIIYVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGRKALAVLDMTSSRMESWSREENRQSLLNHHQLGASLPECITEQICNCAVEMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTDDDSTRMALTLQWGVVPLLVDLSDDAESNISKSVQLMKSRGLISQGDVVLVVSDVAPTRATPTAFQSIQVKTII 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2042 568 Pfam Pyruvate kinase, barrel domain 98 424 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed1g2042 568 Gene3D - 416 562 IPR036918 -
Aed1g2042 568 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 91 426 IPR015813 GO:0003824
Aed1g2042 568 Gene3D - 100 415 IPR040442 -
Aed1g2042 568 PANTHER PYRUVATE KINASE 44 567 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed1g2042 568 SUPERFAMILY PK C-terminal domain-like 444 552 IPR036918 -
Aed1g2042 568 PRINTS Pyruvate kinase family signature 400 416 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed1g2042 568 PRINTS Pyruvate kinase family signature 273 287 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed1g2042 568 PRINTS Pyruvate kinase family signature 356 380 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed1g2042 568 PRINTS Pyruvate kinase family signature 304 330 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed1g2042 568 PRINTS Pyruvate kinase family signature 331 355 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed1g2042 568 PRINTS Pyruvate kinase family signature 155 171 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed1g2042 568 PRINTS Pyruvate kinase family signature 381 399 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed1g2042 568 ProSitePatterns Pyruvate kinase active site signature. 302 314 IPR018209 GO:0004743|GO:0006096
Aed1g2042 568 TIGRFAM pyruv_kin: pyruvate kinase 98 554 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed1g2042 568 Pfam Pyruvate kinase, alpha/beta domain 450 549 IPR015795 -
Aed1g2042 568 SUPERFAMILY PK beta-barrel domain-like 167 236 IPR011037 -
Aed1g2042 568 Gene3D - 167 254 IPR015806 GO:0004743|GO:0006096
Aed1g2042 568 PANTHER PYRUVATE KINASE 44 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2042 Aed-Chr1 17173035 17177064 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2042 K00873 - gmx:100780644 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2042 1 17173035 17177064 Aed1g2042 1 17173035 17177064 ECH
Aed11g1541 11 19632993 19642449 Aed1g2042 1 17173035 17177064 PCT