Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1541 ATGGCACCTGGTTGGTTGAAACTAACGGGGAATGAAGGCGCGCACCATCTTGACCTTCTTCTGCTTCACTCAAGTCAACGTTGGATCATGGCGGCCATTAATCTTTCTTCCGCTACTTCGTCTCTCTTCCAATCCGATCTCTCTCCCTCCAAATACCGAACCAAACGCATTCCACGTCTCCCTACAATCGCCGCAATAACAAACCACACCGATGGAACGCAATTTAACTCCCCCAACGGCTCTCTCTCTCCCATCATCCTTGGCAACGCTAACTCTTCCCTTCAGCTTCACTCCACTAACTCAGACGCGCGTAGGAAAACTAAGATCGTGTGCACAATAGGTCCCTCTACGAGCTCACGTGACATGATATGGAACCTGGCTGAAGTCGGAATGAACGTCGCGCGTTTGAACATGTCCCATGGGGACCACGCCTCGCACCTCCAAACCATCGATTTGGTCAAAGAATACAATGCTCTGTTTCCAGATAAGGTCGTTGCCATCATGCTCGACACCAAGGGTCCTGAAGTTAGAAGTGGAGATGTACCTCAACCTATTTTACTTAAAGAGGGGCAAGAATTTTGTTTCACCACTACGAGAGGGGTTAGCACACAAGACACTGTTAGCGTGAATTACGATGGTTTTCTGAATGATGTGGATGTCGGAGATGTGTTGCTGGTTGATGGTGGAATGATGTCTCTTGCTGTTAAGTCAAAGACAAAAGACTTCGTTAAATGTCAAGTTATCGATGGCGGTGAACTGAAATCTAGGCGTCATTTAAATGTCCGTGGAAAAAGTGCAACACTTCCTTCCATAACTGACAAGGACTGGGAAGATATCAAGTTTGGGGTGGACAATCAAGTAGACTTCTATGCTGTCTCATTTGTCAAGGATGCTAGAGTGGTGTACGAGTTAAAAGACTACCTCAAAAGTCATAATGCCGGTATACACGTGATTGTAAAAATCGAAAGTGCAGATTCCATACCAAATCTTCATTCCATACTTTCTGCTTCAGATGGGGCCATGGTTGCTCGTGGGGATCTTGGAGCTGAACTTCCAATAGAGGAAGTTCCTTTATTGCAGGAGGACATCATTAGAAGATGTCAAAGTATGCAAAAGCCGGTTATTGTGGCAACAAATATGCTTGAAAGCATGATTAATCACCCCACTCCAACAAGGGCAGAAGTCTCAGACATTGCAATTGCAGTAAGGCAAGGTGCTGATGCTATCATGCTTTCAGGAGAAACTGCACATGGAAAATTTCCATTGAAAGCTGTTAAAGTTATGCACACAGTGGCTCTTAGGAATGAATCCAGTGTTCAGAGTGGTGTTGCTAATCCAAGTCAACTGAGTTCCCATGAAAGCCACATGGGAGAAATGTTTGCTTTCCATGCAACAACAATGTCTAACACTCTTAATACTCCTATTATTGTTTTCACCAGAACAGGATCCATGGCTATTCTTTTGAGCCATTATAGGCCTTACTCAACAATCTTTGCATTCACAAATGAAGCAAGAATTAAGCAGAGGTTGGCGCTTTATCATGGCGTTATGCCCATATACATGCAATTTTCAAATGATGCAGAAGAGACCTTCTCTAGAGCCCTCAAGCTACTATTGAGTAAGGGTCATTTACATGAGGGACAGCATGTTACTCTTGTTCAAAGTGGAGCACAACCAATCTGGCGTGAGGAATCCACTCACCACATACAAGTTCGTAAGGTTCATGGATAA 1731 0.4437 MAPGWLKLTGNEGAHHLDLLLLHSSQRWIMAAINLSSATSSLFQSDLSPSKYRTKRIPRLPTIAAITNHTDGTQFNSPNGSLSPIILGNANSSLQLHSTNSDARRKTKIVCTIGPSTSSRDMIWNLAEVGMNVARLNMSHGDHASHLQTIDLVKEYNALFPDKVVAIMLDTKGPEVRSGDVPQPILLKEGQEFCFTTTRGVSTQDTVSVNYDGFLNDVDVGDVLLVDGGMMSLAVKSKTKDFVKCQVIDGGELKSRRHLNVRGKSATLPSITDKDWEDIKFGVDNQVDFYAVSFVKDARVVYELKDYLKSHNAGIHVIVKIESADSIPNLHSILSASDGAMVARGDLGAELPIEEVPLLQEDIIRRCQSMQKPVIVATNMLESMINHPTPTRAEVSDIAIAVRQGADAIMLSGETAHGKFPLKAVKVMHTVALRNESSVQSGVANPSQLSSHESHMGEMFAFHATTMSNTLNTPIIVFTRTGSMAILLSHYRPYSTIFAFTNEARIKQRLALYHGVMPIYMQFSNDAEETFSRALKLLLSKGHLHEGQHVTLVQSGAQPIWREESTHHIQVRKVHG 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1541 576 Gene3D - 436 554 IPR036918 -
Aed11g1541 576 Pfam Pyruvate kinase, barrel domain 105 440 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed11g1541 576 ProSitePatterns Pyruvate kinase active site signature. 315 327 IPR018209 GO:0004743|GO:0006096
Aed11g1541 576 TIGRFAM pyruv_kin: pyruvate kinase 105 574 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed11g1541 576 PRINTS Pyruvate kinase family signature 369 393 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed11g1541 576 PRINTS Pyruvate kinase family signature 413 429 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed11g1541 576 PRINTS Pyruvate kinase family signature 287 301 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed11g1541 576 PRINTS Pyruvate kinase family signature 163 179 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed11g1541 576 PRINTS Pyruvate kinase family signature 394 412 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed11g1541 576 PRINTS Pyruvate kinase family signature 317 343 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed11g1541 576 PRINTS Pyruvate kinase family signature 344 368 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Aed11g1541 576 Pfam Pyruvate kinase, alpha/beta domain 465 554 IPR015795 -
Aed11g1541 576 Gene3D - 105 435 IPR040442 -
Aed11g1541 576 SUPERFAMILY PK beta-barrel domain-like 174 265 IPR011037 -
Aed11g1541 576 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 102 438 IPR015813 GO:0003824
Aed11g1541 576 Gene3D - 174 269 IPR015806 GO:0004743|GO:0006096
Aed11g1541 576 SUPERFAMILY PK C-terminal domain-like 423 574 IPR036918 -
Aed11g1541 576 PANTHER PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC 90 574 - -
Aed11g1541 576 PANTHER PYRUVATE KINASE 90 574 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1541 Aed-Chr11 19632993 19642449 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1541 K00873 - gmx:100776984 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1541 11 19632993 19642449 Aed1g2042 1 17173035 17177064 PCT