Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1407 ATGGACAAAATCCATTACCTCAGGCAGGTTGCTGCTATGAAAAAGTCCCTCTTTGATCAGGGATATCTGGATGAGCAGTTTATCCAACTGGAAGAACTGCAGGATGATGCTAATCCTAACTTCGTTGAGGAAATTGTCACTCTTTACTACCGTGATTCCTCCAGGCTTATCTCTAACTTGGACCACACTATCATCGGAGCCAAAAAGGTGAAAGCAGAATGCACTCTGTTTAGAGAATACTGCAGGGCAAGAAATGGAGAAGGGTAA 267 0.4345 MDKIHYLRQVAAMKKSLFDQGYLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISNLDHTIIGAKKVKAECTLFREYCRARNGEG 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1407 88 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 7 63 - -
Aed1g1407 88 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 65 88 - -
Aed1g1407 88 Gene3D HPT domain 4 65 IPR036641 GO:0000160
Aed1g1407 88 PANTHER - 7 63 IPR045871 GO:0000160|GO:0009927|GO:0043424
Aed1g1407 88 PANTHER - 65 88 IPR045871 GO:0000160|GO:0009927|GO:0043424
Aed1g1407 88 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 87 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1407 Aed-Chr1 12932525 12933207 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1407 K14490 - gmx:100800310 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0231 2 1536163 1537946 Aed1g1407 1 12932525 12933207 ECH
Aed1g1407 1 12932525 12933207 Aed1g1407 1 12932525 12933207 ECH
Aed1g1407 1 12932525 12933207 Aed10g0063 10 437512 438620 ECH
Aed1g1407 1 12932525 12933207 Aed2g0231 2 1536163 1537946 PCT