Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0063 GGGTTCCTTGATGAGCAATTCATTCAGTTAGAGGAATTGCAAGACGATGTTAATCCCAATTTTGTCGAAGAAATTGTGACCCTTTTCTACACTGACTCTGTAAGACTGATCTACAACATAGAACGAGCACTGATGAGTAATGCACCGAATTTCACCAAGCTAGATGATTACATGCATCAATTCAAGGGTAGTTGCTCAAGCATCGGAGCGAAGAAAGTGAAGAATGAATGTACCAGATTCAGTGAATATTGCGCAGCAGAAAACTATGAGGGATGCTTCAGGACTTTCCAACAAATCAATATAGAGTATACGACTCTGAAGAAGAAGCTTGAGACTTACTTTCAGGTATCACATTAA 357 0.395 GFLDEQFIQLEELQDDVNPNFVEEIVTLFYTDSVRLIYNIERALMSNAPNFTKLDDYMHQFKGSCSSIGAKKVKNECTRFSEYCAAENYEGCFRTFQQINIEYTTLKKKLETYFQVSH 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0063 118 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 1 117 - -
Aed10g0063 118 PANTHER - 1 117 IPR045871 GO:0000160|GO:0009927|GO:0043424
Aed10g0063 118 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 18 113 IPR008207 GO:0000160
Aed10g0063 118 CDD HPT 22 77 IPR008207 GO:0000160
Aed10g0063 118 Pfam Hpt domain 24 88 IPR008207 GO:0000160
Aed10g0063 118 Gene3D HPT domain 1 118 IPR036641 GO:0000160
Aed10g0063 118 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 2 115 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0063 Aed-Chr10 437512 438620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0063 K14490 - gmx:100780856 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0063 10 437512 438620 Aed10g0063 10 437512 438620 ECH
Aed2g0231 2 1536163 1537946 Aed10g0063 10 437512 438620 ECH
Aed1g1407 1 12932525 12933207 Aed10g0063 10 437512 438620 ECH