Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1153 ATGAGAGGCAGCAACAAGTTGATCGGTGTAATAAACTTGTTGACCTTCTTGCTGTCAATTCCAATCCTTGTGAGTGGGGGCAAAGCTGGCAACAACACTACAGAATGCCTCAAGTTCCTTCAGTGGCCGTTGATCGGCATAGGAGTGAGCATGATGGTCACTTCCTTAGCCGGTTTGGTCGGTGCCTGTTGCCGCAAAACCTTACTAATGACTTTCTACTTCGTTGTCATGCTCCTCATACTATTGTTCCTCGTCGGCTTCATCATCTTTGCCTATGCTGTCACGCCCAAGGGTTCAGGGAGGGAGATTCAGAACCGCGCTTACTTGGAGTATTACCTGCAGGATTATGAGGGCTGGCTGGAGAAACACGTCGTCAGTGGTAGCTATTGGACAAAGATTAGCTCTTGTCTTAGAGACTCTAATGCTTGTCATGGCCTGCCTCTAACTGCTGATATCTTCTACCATACAAAACTCACTCCTATTCAGTCTGGATGTTGCAAGCCCCAAACAGAGTGTGGGTATGTTTATGAGAACGCGACGGTGTGGAGCCCTGGAGAAGGAGAAGGAAGCAATCCAGTTCCAGAGGCAGACTGCAGTAGGTGGAGCAATGACCAATACTTGCTTTGCTATGACTGCGACTCTTGCAAGGCTGGTGTACTCGCTACTCTCAAGATTACTTGGAGGAAGATCTCTCTCGTTAACATTGTTTCCTCCGCTGCCCTTTTCATTCTTTACATTCCTGCTTATGCACTCTATAAAAACAACCGCAAGACAAATCACTGTGGACCCTGCGGTCAACCAAGGATGACTAAGGCACAACCTCCTTGA 828 0.4783 MRGSNKLIGVINLLTFLLSIPILVSGGKAGNNTTECLKFLQWPLIGIGVSMMVTSLAGLVGACCRKTLLMTFYFVVMLLILLFLVGFIIFAYAVTPKGSGREIQNRAYLEYYLQDYEGWLEKHVVSGSYWTKISSCLRDSNACHGLPLTADIFYHTKLTPIQSGCCKPQTECGYVYENATVWSPGEGEGSNPVPEADCSRWSNDQYLLCYDCDSCKAGVLATLKITWRKISLVNIVSSAALFILYIPAYALYKNNRKTNHCGPCGQPRMTKAQPP 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1153 275 Pfam Tetraspanin family 5 241 IPR018499 GO:0016021
Aed1g1153 275 PANTHER TETRASPANIN-3-LIKE 1 272 - -
Aed1g1153 275 PANTHER TETRASPANIN-8-RELATED 1 272 IPR044991 GO:0009734|GO:0016021
Aed1g1153 275 ProSitePatterns Transmembrane 4 family signature. 48 70 IPR018503 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1153 Aed-Chr1 11248550 11251965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1153 1 271 Miscellaneous Gene Families AT5G60220 52.857 5.27e-87 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1153 - - gmx:100820399 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1153 1 11248550 11251965 Aed1g1153 1 11248550 11251965 ECH
Aed1g1153 1 11248550 11251965 Aed5g0476 5 3463914 3470001 PCT