Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1128 ATGCGAATTCTCGTTGTGCTCTCCCTAGCCACCCTCCTCCTCTTCTCTTCCTTCTCTATCACCCTCTGCGACGACCCCGCCGACGAAGAGGACCTCAGCTTCCTCGACGACGAGCCCTCCGCCGCGCCGGAGCACGACCACCACTACGGCGATGACGCCAATTTCGGCGACTTCGGCGACTTCGAGGACGACCCGGAGGCCTACAAGCAGCCCGAGGTGGACGAGAAGGACGTCGTCGTTCTGAAGGAGAAGAACTTCACCGACGTCGTCAAGAACAACCGCTTCGTCATGGTCGAGTTCTACGCTCCTTGGTGCGGCCACTGCCAGGCCCTCGCGCCGGAGTACGCCGCTGCCGCAACGGAGCTCAAGGGCGAAGATGTAATTTTGGCGAAGGTGGATGCCACCGAGGAGAATGATTTGGGCCAGCAAGATGCTATAGTGTCGTGGATTAAGAAGAAGACCGGACCTGGTATATACAACTTGACTACAGTGGAGGATGCTCAACGCATTTTGACCAACGAAACTAAAGGTCCTGAGAGTGAGGAGCTTGCTGCCGCTTCAAGACTTGAGGATGATGTCAATTTTTATCAAACTGTGAATCCTGATGTAGCAAAGCTTTTCCATATTGACACAGATGTTAAGCGCCCAGCTTTGATCCTCATCAAGAAAGAGGAGGAGAAACTTAGCCACTTTGATGGCAAATTTGAGAAGTCGGCATTAGTGGACTTTGTCTTCTCCAACAAGCATCCTTTGGTAACAATTTTTACAAAAGAAAGTGCCCCAGAAGTCTTCGAAAATCCAATCAAGAAACAGTTGTTGCTGTTTACGACTTCAAATGATTCAGAGAAGTTCATCTCAGCATTTCAAGAAGCAGCAAAATCTTTCAAGGGAAAGTTGATCTTTGTATATGTGGAAATGGATAATGAAGATGTTGGAAAGCCTGTTTCAGAATACTTTGGTATCAGTGGGAATGCTCCAAAAGTACTTGGATACACTGGGAATGACGATGGAAGAAAATTTGTGCTTGATGGAGAGCTGACTGCTGACAAAATTAAGGCATTTGGCGAAGATTTTCTTGAAGACAAGCTAAAACCTTTTTACAAGTCAGATCCAGTTCCTGAAAGTAATGATGGTGATGTGAAAATAATAGTTGGGAATAATTTCGATGAAATTGTCTTGGATGAATCAAAGGATGTTCTCCTCGAGATTTATGCTCCCTGGTGTGGCCATTGCCAATCACTAGAGCCAATATACAACAAGCTTGCAAAACATCTTGGTGATATTGATTCTCTTGTAATAGCTAAGATGGATGGAACAACAAATGAGCATCCCAGGGCTAAGCCTGATGGATTCCCCACTATTCTCTTCTTCCCGGCAGGAAACAAGAGTTTTGACCCTATTACTGTTGATACAGATCGTACAGTGGTAGCCTTCTACAAGTTCCTAAAGAAACATGCATCAATCCCATTCAAGCTCCAGAAACCAACCTCAACTTCTGATGCAAAAGAGAGCCAGAGTAGTAATAGTGACGTGAAGGATGAATTATGA 1548 0.4606 MRILVVLSLATLLLFSSFSITLCDDPADEEDLSFLDDEPSAAPEHDHHYGDDANFGDFGDFEDDPEAYKQPEVDEKDVVVLKEKNFTDVVKNNRFVMVEFYAPWCGHCQALAPEYAAAATELKGEDVILAKVDATEENDLGQQDAIVSWIKKKTGPGIYNLTTVEDAQRILTNETKGPESEELAAASRLEDDVNFYQTVNPDVAKLFHIDTDVKRPALILIKKEEEKLSHFDGKFEKSALVDFVFSNKHPLVTIFTKESAPEVFENPIKKQLLLFTTSNDSEKFISAFQEAAKSFKGKLIFVYVEMDNEDVGKPVSEYFGISGNAPKVLGYTGNDDGRKFVLDGELTADKIKAFGEDFLEDKLKPFYKSDPVPESNDGDVKIIVGNNFDEIVLDESKDVLLEIYAPWCGHCQSLEPIYNKLAKHLGDIDSLVIAKMDGTTNEHPRAKPDGFPTILFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKLQKPTSTSDAKESQSSNSDVKDEL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1128 515 MobiDBLite consensus disorder prediction 38 55 - -
Aed1g1128 515 CDD PDI_a_family 79 143 - -
Aed1g1128 515 SUPERFAMILY Thioredoxin-like 247 377 IPR036249 -
Aed1g1128 515 PANTHER PROTEIN DISULFIDE-ISOMERASE 143 509 - -
Aed1g1128 515 PANTHER PROTEIN DISULFIDE-ISOMERASE 2 141 - -
Aed1g1128 515 ProSiteProfiles Thioredoxin domain profile. 56 249 IPR013766 -
Aed1g1128 515 MobiDBLite consensus disorder prediction 32 55 - -
Aed1g1128 515 CDD PDI_a_PDI_a'_C 380 482 - -
Aed1g1128 515 CDD PDI_b_family 158 247 - -
Aed1g1128 515 ProSitePatterns Thioredoxin family active site. 400 418 IPR017937 -
Aed1g1128 515 PRINTS Thioredoxin family signature 447 458 - -
Aed1g1128 515 PRINTS Thioredoxin family signature 96 104 - -
Aed1g1128 515 PRINTS Thioredoxin family signature 407 416 - -
Aed1g1128 515 SUPERFAMILY Thioredoxin-like 76 247 IPR036249 -
Aed1g1128 515 ProSiteProfiles Thioredoxin domain profile. 358 487 IPR013766 -
Aed1g1128 515 SUPERFAMILY Thioredoxin-like 375 487 IPR036249 -
Aed1g1128 515 Gene3D Glutaredoxin 375 488 - -
Aed1g1128 515 PANTHER PROTEIN DISULFIDE ISOMERASE 2 141 - -
Aed1g1128 515 Pfam Thioredoxin-like domain 183 354 - -
Aed1g1128 515 ProSitePatterns Thioredoxin family active site. 97 115 IPR017937 -
Aed1g1128 515 Gene3D Glutaredoxin 64 145 - -
Aed1g1128 515 PANTHER PROTEIN DISULFIDE ISOMERASE 143 509 - -
Aed1g1128 515 MobiDBLite consensus disorder prediction 493 515 - -
Aed1g1128 515 Gene3D Glutaredoxin 244 374 - -
Aed1g1128 515 Gene3D Glutaredoxin 146 243 - -
Aed1g1128 515 CDD PDI_b'_family 269 359 - -
Aed1g1128 515 Pfam Thioredoxin 78 146 IPR013766 -
Aed1g1128 515 Pfam Thioredoxin 380 465 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1128 Aed-Chr1 11078402 11082562 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1128 K09580 - gmx:100804924 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1128 1 11078402 11082562 Aed1g1128 1 11078402 11082562 ECH
Aed1g1128 1 11078402 11082562 Aed5g0520 5 3742942 3747060 ECH
Aed1g1128 1 11078402 11082562 Aed5g0520 5 3742942 3747060 PCT