Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1090 ATGAGCACCAACTACCCCTTTGATCTTGTGTTGTGTCCCACCCTGCATCTTAGCAGAGCCACTCTGATCACTACAATGCCATCGTTACATTCCTCTTTCTTCCACATGGTTCCTCTCTTCTACCTTCTTTTATTCTCACTCATCATTCCTTATAGTACTTCTCAGGGTCCACCTTCACCTGGCTACTACCCTGGTTCCAAAATTAGCCCTGTTAGCTTTGATGAGGGATTTAGAAACCTTTGGGGACCTCAGCATCAGAAACTAGACCAAGACTCATTAACAATCTGGCTTGACGCTTACTCAGGGAGTGGATTCAAGTCACTTCACTCTTATAGGTCTGGACACTTTGGTGCTGCGATCAAGCTTCAACCTGGTTACACTGCAGGAGTCATAACATCTTTATACCTTTCAAACAACCAAGACTACCCAGGACACCACGATGAAATAGACATTGAGTTCCTTGGTACCACGCCAGATAAGTCATATATCTTGCAGACAAATGTATATATCAGAGGAAGTGGAGATGGGAATATTATAGGGAGAGAGATGAGGTTTCACCTTTGGTTCGACCCAACACAAGATTTTCACAACTATGCTATTCTGTGGGAGCCAAGTGAGATCATATTTTTAGTGGATGATGTCCCAATAAGGAGGTATCCTAGGAAGAGTGATGCCACGTTCCCCACAAGAGAAATGTATGTGTACGGATCAATATGGGATGCATCTTCATGGGCTACAGAGGGTGGAAAATACAAAGCTGATTATAGTTACCAACCCTTCTTTGGTAGATACAAAAACTTCAAAATACAAGGTTGTACCACTGAAGCCTCCACCTCATGCCAGCCACCATCTCCCTCACCATCTGGCTATGGCAGCCTCAGCCCTCAGCAACTTTCTGCATTGCAATGGGTCCAAAACAACCACTTGAACTCTTGGGCAAGTAGAAGGTCATGCCCATGA 960 0.4448 MSTNYPFDLVLCPTLHLSRATLITTMPSLHSSFFHMVPLFYLLLFSLIIPYSTSQGPPSPGYYPGSKISPVSFDEGFRNLWGPQHQKLDQDSLTIWLDAYSGSGFKSLHSYRSGHFGAAIKLQPGYTAGVITSLYLSNNQDYPGHHDEIDIEFLGTTPDKSYILQTNVYIRGSGDGNIIGREMRFHLWFDPTQDFHNYAILWEPSEIIFLVDDVPIRRYPRKSDATFPTREMYVYGSIWDASSWATEGGKYKADYSYQPFFGRYKNFKIQGCTTEASTSCQPPSPSPSGYGSLSPQQLSALQWVQNNHLNSWASRRSCP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1090 319 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 38 309 IPR044791 GO:0004553
Aed1g1090 319 Gene3D - 53 311 - -
Aed1g1090 319 SUPERFAMILY Concanavalin A-like lectins/glucanases 72 309 IPR013320 -
Aed1g1090 319 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 52 264 IPR000757 GO:0004553|GO:0005975
Aed1g1090 319 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 38 309 - -
Aed1g1090 319 Pfam Glycosyl hydrolases family 16 75 256 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1090 Aed-Chr1 10753350 10755756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1090 39 309 Glycoside Hydrolase AT3G44990 65.683 3.51e-125 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1090 K08235 - gmx:100786503 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1090 1 10753350 10755756 Aed1g1090 1 10753350 10755756 ECH
Aed1g1090 1 10753350 10755756 Aed5g0573 5 4184571 4186886 PCT