Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1069 ATGGCGGCTGCTTTTGTTATCTCCGTCGCGCTGTTGGTGGTGGCGGCGGTAGCTGGTGGATCGCCGGCGAGTCTGACGCTGGAGAGAGCGTTTCCGACGAATCATGGAGTGGAGCTGAGTCAGCTGAGAGCTCGTGACGCGTTGAGGCATCGCAGAATGTTGCAGTCTTCAACCGGCGTCGTCGATTTCTCCGTTCAAGGCACCTTCGATCCCTTCCAAGTCGGGCTTTACTATACAAAAGTGCAGTTGGGTTCTCCTCCAGTGGAATTTAATGTGCAGATTGATACTGGCAGTGATGTTCTCTGGATTCAGCTGAACTTTTTTGACCCCGGAAGTTCATCAACATCTTCAATGATCTCTTGTTCTGATCAAAGGTGCAATAATGGAATACAATCATCAGATGCCACATGTTCCAGTCAGAACAACCAGTGCTCCTACACTTTCCAGTATGGAGATGGGAGTGGGACATCGGGCTATTATGTGTCAGATATGATGCATTTGAACACCATTTTTGAAGGATCCGTGACAACGAATTCTACTGCGCCTGTAGTTTTCGGATGTAGCAACCAGCAATCTGGGGACTTGACAAAGTCTGATAGAGCAGTTGATGGGATATTTGGATTTGGGCAACAGGAAATGTCTGTGATTTCTCAGCTCTCATCACAAGGGATTGCTCCAAGAGTGTTCTCCCATTGTCTGAAAGGAGATAGCAGTGGTGGGGGCATATTGGTTCTTGGTGAGATTGTGGATCCAAACATCGTTTACACTTCACTTGTTCCAGCACAGCCTCATTACAATTTAAATCTACAGAGCATCTCTGTCAACGGTCAGACATTGCAAATTGACTCATCAGTTTTTGCAACATCAAACAACAGAGGTACCATTATTGATTCTGGAACGACTTTGGCGTACCTTGCAGAAGAGGCTTACGATCCCTTTGTCTCTGCGATTACAGCTGCAATTCCACAATCTGTACGGAGTGTTGTTTCCAGGGGAAATCAGTGTTACTTAATCACCTCCAGTGTCTCTGACGTCTTTCCTCAAGTAAGCCTGAACTTTGCTGGTAGTGCATCTATGATTTTAAGGCCACAGGACTACCTGATACAACAGAATTCTATTGGTGGTGCTGCAGTGTGGTGTATTGGCTTTCAGAAAATCCAGGGCCAAGAGATAACAATTCTAGGAGATCTCGTATTAAAAGACAAAATTGTTGTCTATGATCTGGCTGGTCAACGCATTGGATGGGCTAACTATGACTGTTCTTTGTCGGTGAATGTGTCTGCAACAACTGGCACTGGCAGAAGTGAATTTGTGAATGCTGGTGAGATAGGTGGAAGCATTTCTTTACGTGATGGACTTAAGTTGACAAAGACAGGGTTCTTGGCTTTCTTTGTGCATCTAACGCTAATTTACTGCTTCGGATTCTTATAG 1431 0.4549 MAAAFVISVALLVVAAVAGGSPASLTLERAFPTNHGVELSQLRARDALRHRRMLQSSTGVVDFSVQGTFDPFQVGLYYTKVQLGSPPVEFNVQIDTGSDVLWIQLNFFDPGSSSTSSMISCSDQRCNNGIQSSDATCSSQNNQCSYTFQYGDGSGTSGYYVSDMMHLNTIFEGSVTTNSTAPVVFGCSNQQSGDLTKSDRAVDGIFGFGQQEMSVISQLSSQGIAPRVFSHCLKGDSSGGGILVLGEIVDPNIVYTSLVPAQPHYNLNLQSISVNGQTLQIDSSVFATSNNRGTIIDSGTTLAYLAEEAYDPFVSAITAAIPQSVRSVVSRGNQCYLITSSVSDVFPQVSLNFAGSASMILRPQDYLIQQNSIGGAAVWCIGFQKIQGQEITILGDLVLKDKIVVYDLAGQRIGWANYDCSLSVNVSATTGTGRSEFVNAGEIGGSISLRDGLKLTKTGFLAFFVHLTLIYCFGFL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1069 476 PRINTS Pepsin (A1) aspartic protease family signature 83 103 IPR001461 GO:0004190|GO:0006508
Aed1g1069 476 PRINTS Pepsin (A1) aspartic protease family signature 294 305 IPR001461 GO:0004190|GO:0006508
Aed1g1069 476 PRINTS Pepsin (A1) aspartic protease family signature 392 407 IPR001461 GO:0004190|GO:0006508
Aed1g1069 476 PANTHER ASPARTYL PROTEASES 4 437 IPR001461 GO:0004190|GO:0006508
Aed1g1069 476 Gene3D Acid Proteases 247 427 IPR021109 -
Aed1g1069 476 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 4 437 - -
Aed1g1069 476 Gene3D Acid Proteases 64 246 IPR021109 -
Aed1g1069 476 CDD pepsin_A_like_plant 77 420 IPR034161 -
Aed1g1069 476 Pfam Xylanase inhibitor N-terminal 77 246 IPR032861 -
Aed1g1069 476 Pfam Xylanase inhibitor C-terminal 264 416 IPR032799 -
Aed1g1069 476 ProSiteProfiles Peptidase family A1 domain profile. 77 416 IPR033121 -
Aed1g1069 476 SUPERFAMILY Acid proteases 72 423 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1069 Aed-Chr1 10602701 10608353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1069 51 421 Miscellaneous Gene Families AT1G44130 26.582 1.73e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1069 - K00924 gmx:100791299 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1069 1 10602701 10608353 Aed1g1069 1 10602701 10608353 ECH
Aed1g1069 1 10602701 10608353 Aed5g0600 5 4379574 4384242 PCT