Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1014 ATGACCGAGGTCCTTCATTTTGTTGCTTCATCAACAACAAAGACAAGGACAACCTCAGCAACCACAACAACAACACCACCACCAACAACAGCAACAACCTCAGCAACTCCTAATTCTTCATTCTCTTCTTCTCGCAATGCCTTTGATCTCTTGGCGCTTCTTCTGACCCTTCTCAGGAAAACCTTCCAGCTAAATATTCCTCGCAAAAACAATAACATCTGCTCCATTATTATGGACATAGGCTCCCCAACTAACGTGCGCCATGTTGCGCATGTCACCTTTGATAGGTTCAACGGTGCATCTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTGTCGTATGACTCAAGAGGGAACAGTGTGCCAACGATTCTGCTGTTGATGCAAAGGCATCTGTATGTTCAAGGAGGGTTGCAGGTGGAGGGGATTTTCAGAATTAACCCGGACAATGGTCAAGAGGAACATGTTAGGGATCAATTGAATTTGGGAGTGGTCCCAGAAGGCATTGATGTACATTGTTTGGCAGGGCTAATTAAGGCTTGGTTTAGGGAACTTCCTTCCGGCATTCTGGATTCATTATCACCAGAGCATGTCATGCAATGCCAGACTGAGGAGGAATGTGCTGAACTAGTGAGACATCTGCCTCATACTGAAGCTTCACTCTTGGACTGGGCCATCAATCTGATGACTGATGTTGTCCAACATGAACATGTTAATAAGATGAATGCACGTAACATTGCCATGGTTTTTGCACCAAACATGACTCAGATGGCAGACCCTATATCTGCATTGATGTATGCAGTTCAAGTAATGAACTTCTTGAAGACACTTATATTAAGGACACTGCGGGAAAGAAAGGATTCTGTGGTAGAATCTTATCCTAGATATTATTTACAACCTTCTGTTGATAATAAAAACCACAGACTTTTGGAGTCCTTCCAGCAAGATACTCCTGCAGAAAATAATGAAGAGGCTCAGGAAAACTTTGTTTTAGAGAAAACTGCCTCGGACCGTTCCCCTGAATCACACCAAAACAACTCAACTGAAGAACCTGACAGTTTGAAAAACTCTTCTGAGAATCTTGTTAGCAATGAGGACTTGTATTGTGAGTTTCCACCCGTAGGAAATATGAGAAAGAGTAAAACTGGCCAATCAAGTAAGTCAAATGCTAAAAAAGAGCCCAAAAAGACAAGAGGCAACAACAACCTGTGA 1212 0.4257 MTEVLHFVASSTTKTRTTSATTTTTPPPTTATTSATPNSSFSSSRNAFDLLALLLTLLRKTFQLNIPRKNNNICSIIMDIGSPTNVRHVAHVTFDRFNGASVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYVQGGLQVEGIFRINPDNGQEEHVRDQLNLGVVPEGIDVHCLAGLIKAWFRELPSGILDSLSPEHVMQCQTEEECAELVRHLPHTEASLLDWAINLMTDVVQHEHVNKMNARNIAMVFAPNMTQMADPISALMYAVQVMNFLKTLILRTLRERKDSVVESYPRYYLQPSVDNKNHRLLESFQQDTPAENNEEAQENFVLEKTASDRSPESHQNNSTEEPDSLKNSSENLVSNEDLYCEFPPVGNMRKSKTGQSSKSNAKKEPKKTRGNNNL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1014 403 CDD CRIB 78 97 - -
Aed1g1014 403 MobiDBLite consensus disorder prediction 333 403 - -
Aed1g1014 403 Gene3D CRIB domain 78 120 IPR036936 -
Aed1g1014 403 SMART RhoGAP_3 119 282 IPR000198 GO:0007165
Aed1g1014 403 PANTHER MKIAA1688 PROTEIN 1 99 IPR044785 GO:0005096
Aed1g1014 403 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 100 386 - -
Aed1g1014 403 MobiDBLite consensus disorder prediction 346 364 - -
Aed1g1014 403 MobiDBLite consensus disorder prediction 386 403 - -
Aed1g1014 403 PANTHER PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN 1 99 - -
Aed1g1014 403 SMART PBD_5 80 116 IPR000095 -
Aed1g1014 403 Pfam P21-Rho-binding domain 79 110 IPR000095 -
Aed1g1014 403 Pfam RhoGAP domain 122 256 IPR000198 GO:0007165
Aed1g1014 403 ProSiteProfiles Rho GTPase-activating proteins domain profile. 105 290 IPR000198 GO:0007165
Aed1g1014 403 PANTHER MKIAA1688 PROTEIN 100 386 IPR044785 GO:0005096
Aed1g1014 403 SUPERFAMILY GTPase activation domain, GAP 101 279 IPR008936 GO:0007165
Aed1g1014 403 CDD RhoGAP 122 278 - -
Aed1g1014 403 Gene3D Rho GTPase activation protein 121 283 IPR008936 GO:0007165
Aed1g1014 403 ProSiteProfiles CRIB domain profile. 80 93 IPR000095 -
Aed1g1014 403 MobiDBLite consensus disorder prediction 9 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1014 Aed-Chr1 10258565 10262108 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1014 - K20642 gmx:100798012 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1014 1 10258565 10262108 Aed1g1014 1 10258565 10262108 ECH
Aed1g1014 1 10258565 10262108 Aed5g0664 5 4881923 4885595 PCT