Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0935 AAAACGGTCACTACTGCTTGGCTTGGTGTTGTTGTCTTCGTCTTCAGTAATAGAAATAGAAATTTCAAAGCACGGCACTGTTATTTTCTTCTAGAAGGAGCCCTAGTTTGCGTTCGTTCTCCACACGCTTCTCATCATACGAATGCTTTTTTGATCATGGCTTCCACAGCCTCTTCGCTACTCCGAGCTTCTAGGTCCAAGCTCGCTTCCTCTTCCTCAGCTTCTCTTTCTAGAACCTTCGCTCGCTCCGCTCCTCGCCGATCCCCCGGCTCCTCCACCGCCACCCGCTCCTTCGGCTCCGCCGTCCCGCGATGGAGCCACGGCGTCGATTGGCGCTCTCCGCTCGGCCTCCGCCCTCAGATCAGAGCCACTGCTCCCCTCATCGAACGCTTCCACCGCAGGATCGCCACTAGCGCTACTGAGAATCCTTTCAAGGGAAACCTCACGAGTCTCCCTAAGCCTGGTGGTGGCGAGTTTGGAAAGTTCTACAGCCTTCCGTCATTCAATGATCCAAGAATCGATAGGTTACCATACTCTATCAGAATTCTCCTTGAATCTGCCATTCGTAATTGTGACAATTTCCAAGTTACTAAGGAGGATGTTGAGAAGATTATTGACTGGGAGAACTCTGCTGTGAAGCAAGTTGAGATTCCTTTCAAGCCTGCTCGTGTTCTACTGCAGGATTTTACTGGAGTCCCAGCTGTCGTTGACCTGGCTTGCATGCGTGATGCGATGAATAAGCTTGGCAGTGATTCTAATAAGATCAATCCTTTGGTTCCTGTTGATCTTGTGATTGATCATTCAGTTCAAGTTGATGTAGCAAGGTCAGAGAATGCAGTGCAGGCGAATATGGAGCTTGAGTTCAAAAGAAACAAGGAGAGATTTGCTTTCCTTAAATGGGGGTCAAATGCTTTCCGTAACATGCTTGTTGTCCCTCCTGGTTCTGGCATAGTACATCAGGTAAATCTTGAATATCTTGGACGTGTTGTTTTCAACAATGAGGGCTTGCTCTATCCTGACAGTGTGGTTGGAACTGATTCACATACAACAATGATAGATGGGCTTGGAGTTGCTGGATGGGGTGTTGGGGGTATTGAAGCTGAGGCAGCAATGCTTGGCCAGCCTATGAGTATGGTGTTACCTGGTGTTGTTGGGTTCAACTTATCTGGAAAACTGCGCAATGGTGTTACAGCAACTGACTTGGTTCTAACTGTGACACAAATTCTTAGGAAACATGGTGTTGTAGGGAAATTTGTTGAATTTTATGGTGATGGTATGGGTGAGTTATCATTAGCTGACAGGGCCACTATTGCCAATATGTCTCCTGAATATGGTGCAACCATGGGCTTCTTCCCTGTAGATCATGTTACATTACAATACCTCAAATTAACTGGAAGAAGTGATGAGACTGTGGCAATGATAGAGGCCTATCTCAGGGCAAACAAATTGTTTATTGACTATAATGAGCCTCAACCGGACAGAGTTTATTCATCCTATCTTGAATTGAACCTTGACGAAGTTGAACCATGCATCTCAGGACCCAAGAGACCTCATGATCGGGTGCCTTTGAAAGAAATGAAGGGTGATTGGCATGCTTGTCTTGACAACAAAGTGGGATTTAAGGGATTTGCTATACCAAAAGATGTACAGGGCAAAGTTGTAAAATTTGATTTCCATGGGCAGCCATCGGAGCTCAAGCATGGCAGTGTTGTGATTGCTGCAATCACAAGCTGTACAAACACATCAAACCCAAGTGTTATGCTTGGGGCTGCTCTTGTAGCAAAGAAGGCTCACGAGCTAGGTTTGAAGGTTAAGCCATGGGTGAAAACAAGTCTTGCTCCTGGCTCTGGAGTTGTTACAAAATATCTACTCAAGAGTGGCCTGCAAAAGTATCTAAATGAACAGGGTTTCAATATTGTTGGATTTGGCTGTACCACATGTATTGGCAATTCAGGGGAAATAGACCCATCAGTTGCTTCCACTATCACTGAAAATGACATTGTTTCTGCTGCTGTATTGTCTGGGAACCGTAATTTTGAGGGCCGTGTGCATCCCTTGACAAGAGCTAACTACCTTGCTTCACCACCTCTAGTTGTCGCTTATGCTCTTGCTGGCACAGTTGACATTGACTTTGAAAAGGAGCCAATAGGAAAAGGGAAGGATGGAAAGAATGTTTACTTAAGGGATATCTGGCCATCCACTCAAGAAATTGCTGAGGCTGTCCAATCCAGTGTGTTGCCTGACATGTTCCGAAGTACATATGAATCTATTACCAAAGGTAACCAAATGTGGAACCAACTACAAGTTCCTGCTGAGACCCTGTACTCATGGGACCCCACGTCAACATATATTCATGAACCTCCATACTTCAATGGCATGACCATGGATCCTCCTGGAGCTCACGGTGTGAAAGACGCCTATTGTCTGCTGAATTTTGGTGACAGTATAACAACCGATCACATTTCTCCTGCTGGAAACATTAACAAGGACAGTCCTGCTGCAAAATACCTTCTGGAGCGAGGGGTAGAACAGAAGGACTTCAACTCTTATGGAAGTCGTCGTGGCAATGATGAAGTGATGGCAAGGGGAACATTTGCCAACATTCGTCTTGTTAACAAGCTCTTAAATGGGGAAGTTGGCCCCAAGACAATTCACGTTCCAACTGGGGAGAAGCTTTATGTGTTTGATGCAGCACAGAGATACAAGGCTGAGGGGCAGGCAACCATTGTGCTGGCTGGAGCTGAATATGGTAGTGGGAGTTCCAGGGACTGGGCCGCCAAGGGTCCCATGCTATTGGGTGTCAAAGCTGTGATAGCTAAAAGTTTTGAGAGAATTCATCGTAGTAATTTGGTAGGAATGGGTATTATTCCTCTTTGCTTTAAATCTGGCGAGGATGCTGATACATTGGGATTGACTGGTCACGAACGTTATTCTATTGACCTCCCAAATAACATCAACGAGATAAAGCCTGGCCAAGATGTCACTGTAACAACTAATACTGGAAAATCTTTCACCTGCACAGCTCGCTTCGACACTGAGGTGGAACTTGCTTACTTTAACAATGGGGGCATACTTCCATATGTCATCAGGAACCTCATTAAACAGTGA 3108 0.4569 KTVTTAWLGVVVFVFSNRNRNFKARHCYFLLEGALVCVRSPHASHHTNAFLIMASTASSLLRASRSKLASSSSASLSRTFARSAPRRSPGSSTATRSFGSAVPRWSHGVDWRSPLGLRPQIRATAPLIERFHRRIATSATENPFKGNLTSLPKPGGGEFGKFYSLPSFNDPRIDRLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWENSAVKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFKRNKERFAFLKWGSNAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFNLSGKLRNGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRANKLFIDYNEPQPDRVYSSYLELNLDEVEPCISGPKRPHDRVPLKEMKGDWHACLDNKVGFKGFAIPKDVQGKVVKFDFHGQPSELKHGSVVIAAITSCTNTSNPSVMLGAALVAKKAHELGLKVKPWVKTSLAPGSGVVTKYLLKSGLQKYLNEQGFNIVGFGCTTCIGNSGEIDPSVASTITENDIVSAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGKGKDGKNVYLRDIWPSTQEIAEAVQSSVLPDMFRSTYESITKGNQMWNQLQVPAETLYSWDPTSTYIHEPPYFNGMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGNINKDSPAAKYLLERGVEQKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTIHVPTGEKLYVFDAAQRYKAEGQATIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYSIDLPNNINEIKPGQDVTVTTNTGKSFTCTARFDTEVELAYFNNGGILPYVIRNLIKQ 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0935 1035 SUPERFAMILY Aconitase iron-sulfur domain 156 770 IPR036008 -
Aed1g0935 1035 Gene3D - 734 795 - -
Aed1g0935 1035 Gene3D Aconitase, domain 3 141 509 IPR015931 -
Aed1g0935 1035 Pfam Aconitase C-terminal domain 834 961 IPR000573 -
Aed1g0935 1035 ProSitePatterns Aconitase family signature 1. 570 586 IPR018136 -
Aed1g0935 1035 MobiDBLite consensus disorder prediction 79 100 - -
Aed1g0935 1035 Gene3D Aconitase, domain 3 510 733 IPR015931 -
Aed1g0935 1035 TIGRFAM aconitase_1: aconitate hydratase 1 160 1033 IPR006249 -
Aed1g0935 1035 PRINTS Aconitase family signature 337 350 IPR001030 -
Aed1g0935 1035 PRINTS Aconitase family signature 284 297 IPR001030 -
Aed1g0935 1035 PRINTS Aconitase family signature 413 426 IPR001030 -
Aed1g0935 1035 PRINTS Aconitase family signature 427 440 IPR001030 -
Aed1g0935 1035 PRINTS Aconitase family signature 574 585 IPR001030 -
Aed1g0935 1035 PRINTS Aconitase family signature 351 366 IPR001030 -
Aed1g0935 1035 PRINTS Aconitase family signature 636 649 IPR001030 -
Aed1g0935 1035 PRINTS Aconitase family signature 308 316 IPR001030 -
Aed1g0935 1035 PRINTS Aconitase family signature 509 523 IPR001030 -
Aed1g0935 1035 PANTHER ACONITATE HYDRATASE 105 1035 - -
Aed1g0935 1035 Gene3D Aconitase, domain 4 798 1034 IPR015928 -
Aed1g0935 1035 CDD AcnA_IRP 223 707 - -
Aed1g0935 1035 CDD AcnA_IRP_Swivel 811 981 IPR044137 -
Aed1g0935 1035 Pfam Aconitase family (aconitate hydratase) 202 705 IPR001030 -
Aed1g0935 1035 SUPERFAMILY LeuD/IlvD-like 774 1033 - -
Aed1g0935 1035 ProSitePatterns Aconitase family signature 2. 636 649 IPR018136 -
Aed1g0935 1035 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 105 1035 IPR006249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0935 Aed-Chr1 9709515 9716947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0935 K01681 - gmx:100810088 1854.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0935 1 9709515 9716947 Aed1g0935 1 9709515 9716947 ECH
Aed1g0935 1 9709515 9716947 Aed5g0742 5 5525646 5536696 PCT