Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0720 ATGCAAGTGCGTTACTCCTACTACGTTCGAAATCTAAGCACTGGGCTCCGATCAAGTTCAGCCAAACGCGCTACTACCAAAACGCAATCTTCTTCTTCTTCTTCTTCTCTAGCCAAGTTATTCCTCGATGAGGATTTCACGCTCTCAAGCCTCAAGCTTAAGCGACCCTCTGCTTCAGGTGATTCGTCTAATGGGGTGTTCAAGCAGATTTCTTCTATTTTCCGCGCTGGTAAGTCAGTCAAGAAATCTGACTCGGAGGAAATTGATGGGGCAAAGGAGTTTGAAAGAATGCCAAATCTATCATGGTTGTCAAGCGTATCTCAAAGCAATTTATTACTGCAACGGAAAGAGCAATCTCGTAAAAAGAAACAAAAATGTGTGTTTGAATTTACTCAAGAAACCCGTTTTCAGAAGTTAATTCAAGTCTGTGCAAGGATACTAGGACCAGAGGCTACCCTTGAGTTGTTTGGTAAAGTGGGACGAGAACCAGGTGTGAAAGGATACAATGCATTGGTAGAAATGTGCATAGATAAGGCCAGGGGAACTGATGATGAAGACATTGCAATAGAAGAACTGGGGAAGGTTTTTAACCTTTTCAAATCAATGAGGGAACAAGGTTTAGAGTTACAAGAGCAAACATATCGCCCACTACTTTTGTATATGATTGACATGTGTATGGTTGAGGAGTTTCAATTTTTCTGTGTTGTAATCAAAGATGAGAATCCCAGTTCAGTTACAAGACTGGGTTACTATGAAATGTTGCTGTGGTTAAAAGTTAATAACGGACAGAAGATACAGGGTATTTGTGATTATATTGCAGAGAATGATGGTAAAGACAAATCTGATATACGAGAAAGTTATTTATTAGCTCTTTGTGAAAGTGAACGGACGGAGGAGATTTTGAAGCTGTTGGAAATCATAGACATAAAAAACCTTTCATCTGCTGAATCTGTAGCAAAGATATTTCAGGCATTAGGAAGATTACTATTGGGACCTGTAGCGGAGAAGTTCCTTTTAGACTTTAAAACAAGTGATCGTGAAGCAGATAATATTACAAACTTCATTGCTAGTTATGCTGTTAGCATTCCAGATTTATTGGTTGAGGATGTCATAAAAAAATTCAAAGATTTGCACCGAAGACTAGAAGTTTCACCTTCATCCTCATCATATGAGAAGCTCATTTTACATAGCTGTGCATTGCTCAAGGTACATGTAGCACTTGATATTGTTGATGAAATGTGTGAAGCAGGCTTGACTCTATCAACCAAGTTGTTACACTCAATATTACAAATTTGTGATGATACATCTGAATATAATTTGGTCCACCGAATCTTCTCAACCATGTGTCGCTACAATTTGGAATCAAATTATGAAACATCCAGATCTATGGTAGACTTGTTCTTGAAGATGAAAGATATTGAAGGTGCATATAAGATGCTTGATGATTTGGAGGAGTTAAATTTGAAGCTGACAGCAGGCATGTACAATGTCATAATGGCAGAAGGTTTTCAAGAGAAAAACATTAGTGATGGGATGAGGGTTCTTGAGCACATGCAATGTGCTGATATAAAGCCTAATTCACAGACTTTCAGCTACCTGATTAGCAACTCCGAAACAGAAGAGCATATAGTGAAGTATTATGAAGAACTGAAGCAATCTGGAATAGTAGCTACAAAGCAAATTTTCATGGCACTTATAAATGCTTATGCTGCTTGCGGACAGTTGGAGAAAGCAAAAAAGGTAATCTTAGATCCATTGATACCACCGAACAGCTTGAACCAAATCAAGGGTGTTCTTGTCTCAGTACTTGCATCACATGGGCAATTGTCTGAGGCTCTTGTTATTTATGAGGAAATCAAGCAAGCTGGACACAAGCTGGAGGCAAAAGAAGTTCTGAGTCTCATTGTGCACACTCATTCCGAGGGAGAGTTGGATAGGTTGCTTCTGCTACTTGAGGAATTGCGTGATACAGACTATTGGAATGATGCTTGCTGCAGAATCATCTTGTATTGTATTTGGAATAAGCATTTAAGTTCCGCTGTTGAATTGTGTAATCTGCTCAAGGATAAGTTCCAAAGTGATGAGCAAGTTATGGAATTTCTCTTTGATAAGGTATTTTCTCTGATTGAAGAGTCTGAGTCCAATCATTTGCACACTTGCCTCGAGTTGCTTTCGGAAATCAAGGATAAGCTTGGGCTTTTGCCTTCCCATAAACGTTATGATTCTCTGCTACGTGCTGATTTACATGATACTGAATGA 2259 0.3891 MQVRYSYYVRNLSTGLRSSSAKRATTKTQSSSSSSSLAKLFLDEDFTLSSLKLKRPSASGDSSNGVFKQISSIFRAGKSVKKSDSEEIDGAKEFERMPNLSWLSSVSQSNLLLQRKEQSRKKKQKCVFEFTQETRFQKLIQVCARILGPEATLELFGKVGREPGVKGYNALVEMCIDKARGTDDEDIAIEELGKVFNLFKSMREQGLELQEQTYRPLLLYMIDMCMVEEFQFFCVVIKDENPSSVTRLGYYEMLLWLKVNNGQKIQGICDYIAENDGKDKSDIRESYLLALCESERTEEILKLLEIIDIKNLSSAESVAKIFQALGRLLLGPVAEKFLLDFKTSDREADNITNFIASYAVSIPDLLVEDVIKKFKDLHRRLEVSPSSSSYEKLILHSCALLKVHVALDIVDEMCEAGLTLSTKLLHSILQICDDTSEYNLVHRIFSTMCRYNLESNYETSRSMVDLFLKMKDIEGAYKMLDDLEELNLKLTAGMYNVIMAEGFQEKNISDGMRVLEHMQCADIKPNSQTFSYLISNSETEEHIVKYYEELKQSGIVATKQIFMALINAYAACGQLEKAKKVILDPLIPPNSLNQIKGVLVSVLASHGQLSEALVIYEEIKQAGHKLEAKEVLSLIVHTHSEGELDRLLLLLEELRDTDYWNDACCRIILYCIWNKHLSSAVELCNLLKDKFQSDEQVMEFLFDKVFSLIEESESNHLHTCLELLSEIKDKLGLLPSHKRYDSLLRADLHDTE 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0720 752 Gene3D Tetratricopeptide repeat domain 536 683 IPR011990 GO:0005515
Aed1g0720 752 Pfam PPR repeat 598 623 IPR002885 -
Aed1g0720 752 Pfam PPR repeat 562 582 IPR002885 -
Aed1g0720 752 PANTHER OS02G0132600 PROTEIN 68 746 - -
Aed1g0720 752 Pfam Pentacotripeptide-repeat region of PRORP 395 551 IPR033443 -
Aed1g0720 752 Gene3D Tetratricopeptide repeat domain 131 329 IPR011990 GO:0005515
Aed1g0720 752 Gene3D Tetratricopeptide repeat domain 366 535 IPR011990 GO:0005515
Aed1g0720 752 PANTHER OS02G0132600 PROTEIN 68 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0720 Aed-Chr1 8326279 8334044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0720 355 654 Glycosyltransferase AT1G05670 20.388 1.69e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0720 - - gmx:100306302 1215.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0720 1 8326279 8334044 Aed1g0720 1 8326279 8334044 ECH
Aed1g0720 1 8326279 8334044 Aed5g1021 5 8062740 8072182 PCT