Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0716 ATGGGTATGATGAATGATGCACAGAAGCAACAGCTTCATCATCAGGGTAATGGTGGTGGGAGCAGAACCAATGGCTTCATTCCTAGTTCTTTCCGTTCTCTCTCTAGCTACCTGAGAATTGTTTCCTCTGGTGCTTCCACTGTTGCACGTTCTGCTACCTCGGTTGCTTCATCGATTGTGGAGAGGAATGATGACCCTGACCATGATCAGGTTATCTGGGCCGGGTTTGACAAGTTAGAGGACGAGGGTGAAGTTATTCAGCAAGTACTTCTTCTAGGCTATCAATCTGGATTCCAGGTTTGGCATGTTGATGAATCAAATAATGTCCGAGACCTTGTTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGGTACCTAATCCAATTGCATCAAAGAGATCAGAAGACAAGTATGCAAACAGCCGCCAGCTGTTGGTAGTTTGTACTGATGGATTCTTTGCTGGAGGTAGCAATGTTCAGGATGGATCGACCACCCCTTACTATGGGAGCACTTCAAGGAGCACTTCAAGCTCCCATGACCAAATAAATGGAAACTATCTGCCAACTACCGTTCGATTTTATTCTATGAAATCTCAATCATACGTTCATGTACTGAAGTTTAGATCAGTTATACATTGTTTTGATGCTACCACGTTAGAAAGGGAATATACTTTACTTACCAATCCTGTAGTAGTGAGTTGCCCTGGTTCTGGAGGCATAGGTTATGGACCACTTGCGGTGGGACCAAGATGGTTGGCTTATAGTGGAAGTCCAGTTGCAATTCCCAATGCAGGACATGTCTGTCTACAACATTTGACACCTTCTGAAAGCTTCCCTGGTTTTTCTTCTAATGGAAGCTTGATTGCACATTATGCCAAAGAGTCCAGCAAGCATCTTGCTTCTGGGATCGTGACCCTTGGAGACATGGGGTATAAGAAACTTTCTAGATATTGCTCGGATAGCAATGGTTCATTACAATCTGTAAACTCTGGCTCTAAGGGCAATGGAACCATTAATGGCCATTCAGCAGACGCAGATGACATTGGAATGGTAATTGTTAAAGATACTGTCACAAAAAACGTTATTGCCCAATTCCGGGCACACAAGAGTCCTATTTCAGCATTGTGCTTCGATCCTAGTGGCACCATATTGGTGACAACTTGCATTCAGGGTCATAATATAAATGTTTTCAAGATAATGCCTGCAAGTGAGAATTTGTCAGCATCTGATACTGGTCCTTCTTATGTTCATCTGTACAAGTTGCAACGTGGCTTTACAAATGCAGTTATACAAGATATCAGTTTCAGCGATGACAGCAAGTGGATTATGATTAGTTCCTCAAGGGGCACTAGCCATCTATTTGCCATAAATCCTCAAGGAGGACATGTAAATATTCAGTCCTTTGATGATAGTTTTACAGCAAAACATAGTGGATTAGGCACTGCAACTAATCATGCAGTTCGCCGGTCTCATAGTTCAGCCATGCAAATGCCTAAACAGCAGAGCCTGTTTGTTGCTGGCCCTCCAATCACGCTTTCCGTTGTAAGCAGGATTAGGAATGGAGCTAATGGCTGGAGAGGCATTGTAAATGGTGCTGCTGCAGCTGCAACTGGTAGGAAAAATGCTATGTACAGCGCTATTACTTCATCTTTTCGTAACTATAAAGGCAATGAAGGGAACTTTTCCAAGGCAAAGTATCAACTGTTGGTCTTTTCACCCACTGGCTCCATGATACAATATGCTGTTAGAACAATAACTGGTCAAGATGCATCTGTTGTTTCTGGATTGTCCCCTGCTTATGAATCCACTCCACAGGCTGATACAAGATTAGTAGTTGAGGCTATCCATAAATGGAATATATGTCAGAGTCAGAGTCGGAGAGAGCGAGAGGATGACGTAGACATATATGGTGAGAATGGAATTTCGAATGTTAATAAAATATATCCAGAGGAAAACACCATTAGCCCGAAAATCAAGAATGGAGTCATGAAAGTGAGTCCCTATCTTGAGGAGGAGCATCATTTGTATATTTCAGAAGCTGAACTGCGAATGCATCAAGCTCAGACTCCATTGTGGGCAAAACCAGAGATATATTTTCATTCAATGTTGCATGAGTCTACAATAATGGATGAAGAAGCTGCTTCAGGAGCTAGACCAAAAGACTTGGTTCCAATTTTCAACTATATTCAGACCCCAAAATTACACCAAGCAAGGACTTCTGCTATGGATAGCAAGACAAATGAACAATTGTTTTATCGCAGTTCGCGGCCGGCTGGAAATGGCAGGATTCCACCCAGGACTATTTTGGGATCTCCTGAGTGTGTGAATAATGCTTGTGATGCTGTTTCTGAATTTAAAAGTAGAATTGAAGGACCTTAG 2382 0.4236 MGMMNDAQKQQLHHQGNGGGSRTNGFIPSSFRSLSSYLRIVSSGASTVARSATSVASSIVERNDDPDHDQVIWAGFDKLEDEGEVIQQVLLLGYQSGFQVWHVDESNNVRDLVSRHDGPVSFMQMVPNPIASKRSEDKYANSRQLLVVCTDGFFAGGSNVQDGSTTPYYGSTSRSTSSSHDQINGNYLPTTVRFYSMKSQSYVHVLKFRSVIHCFDATTLEREYTLLTNPVVVSCPGSGGIGYGPLAVGPRWLAYSGSPVAIPNAGHVCLQHLTPSESFPGFSSNGSLIAHYAKESSKHLASGIVTLGDMGYKKLSRYCSDSNGSLQSVNSGSKGNGTINGHSADADDIGMVIVKDTVTKNVIAQFRAHKSPISALCFDPSGTILVTTCIQGHNINVFKIMPASENLSASDTGPSYVHLYKLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGHVNIQSFDDSFTAKHSGLGTATNHAVRRSHSSAMQMPKQQSLFVAGPPITLSVVSRIRNGANGWRGIVNGAAAAATGRKNAMYSAITSSFRNYKGNEGNFSKAKYQLLVFSPTGSMIQYAVRTITGQDASVVSGLSPAYESTPQADTRLVVEAIHKWNICQSQSRREREDDVDIYGENGISNVNKIYPEENTISPKIKNGVMKVSPYLEEEHHLYISEAELRMHQAQTPLWAKPEIYFHSMLHESTIMDEEAASGARPKDLVPIFNYIQTPKLHQARTSAMDSKTNEQLFYRSSRPAGNGRIPPRTILGSPECVNNACDAVSEFKSRIEGP 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0716 793 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 6 778 IPR045142 GO:0006914
Aed1g0716 793 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 6 778 - -
Aed1g0716 793 MobiDBLite consensus disorder prediction 1 25 - -
Aed1g0716 793 Gene3D - 67 494 IPR015943 GO:0005515
Aed1g0716 793 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 95 458 IPR011047 -
Aed1g0716 793 MobiDBLite consensus disorder prediction 8 25 - -
Aed1g0716 793 Pfam Breast carcinoma amplified sequence 3 508 715 IPR022175 -
Aed1g0716 793 SMART WD40_4 359 399 IPR001680 GO:0005515
Aed1g0716 793 SMART WD40_4 415 456 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0716 Aed-Chr1 8291457 8296578 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0716 - - gmx:100784596 1313.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0716 1 8291457 8296578 Aed1g0716 1 8291457 8296578 ECH
Aed1g0716 1 8291457 8296578 Aed5g1027 5 8107676 8114651 PCT