Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1766 ATGGATGAAGATTTGATTGATGAGGCAACCCAGTTAGAGGTTGCCGAGGATTCACAGCGCCAAAACAAAGATTCACCTAACACGGAATGCCGAAAAATCTTGAAATCCCAACAAGAAGCCTTCATCCCTGTTAAGCAGGACTACTCCCAGATACCACCTCGGGAATATGATAACATTCTACATGGTAAAAATGTAGTTGAAGGTATTGACCATGCAGATACATCACAGCATGTTATGGTTGAAGAGTTAACAGTAAAAAGTTACAATGGCTCAAGCTTGGATATTGGCACATCAAACAACCGAGAGCAAATGTATAATCAGCAGAACCATTGGCAAAATCTTTATCAGCTAGCAAGTAATTCAGGAATTGGAAATTCACTAAGTGATATTGGAACCAGAAACAGTGTCCAAGCTACATCTAGTGCTTGGGAGGATATTGGATCCTCATCTTTCCCAGAGATGTTAGCTAGAAAATCTCTCAGTGATGGCCAGAGCAATGTCATGGAACACTTGGCAGCTGTTGAAAATAAAGAGGGTGCAGGTGATGTTCGTCAAGGAACACGGACTAAAATGATATCCCGATCAGGATATGATTTTTTCATAAAAAATACGTTGAGGGGTAAGGGTATTGTATATAAAGGTCCATCTTCTGATGGCTTCTGTGTTCAGTCTAGAGAGCAAAACCGGACAAAGATTGGCATTGATGCAGATCAGAATAGGATGAAGACTGGCATTGGTGCTGAGCAGAATCAGATGAAGACTGTCATTGATACAGATCAGAATCTGCTGAAGACTAGCATTGATGCAGATCAGAATCGGATGAAGAATGTCATTAATGCAGATCAGAATCAGATGAAGACTGGCATTGGCACAGATCAGAATCAGATGAAGAATGGCATTGGTACTGATCAGAAACAGATGAATACTGGCATTGGTACTCACTTGAACTCTAATCAATCAGTGGGCTCCAAAACTGCAAAGTTTCCTTCTTATCGTGGTGCTACGCTTAGATCCGGCAGGTCTGAATGTGATGGTGTAACTTTGAGAGAATGGCTGAAACACGGGCACCACAAAGCAAGCAAAGTGGAAAGTTTGAAAATATTTAGGAAGATTGTGGATTTGGTGGACAATTCTCACTCTCAGGGAGTTGCATTGCATAACCTGTGTCCATCTTATATTAAATTGACGCCATCAAACCAGGTCACGTACCTTGGTTTACCTGTTCAAAAACAGATGGTGGAGAGTGTTGTAAATTCTGAAGTTGTTCACATAGAGAATTCTTTTATTAGAAAAAGGCTGTCAAAGCAAGTAACATTTCCCTCTCTTGATATGGGGTCAAAGAAACAAAAAATTAATGAGATTGTGAGAGTTACTGGTGGTGACATGTGTCTTGAAACTGCAAGTGATAGGAAACTTCATAGTCATACAGTTGGATCACAAGATTATTACAATGAATATGAGGAAGGTGCCCAATTTTCTAAATATAACATTGGAAGAATGTCTAGCATCCCGCATGTATCTAATGCAGGTCAAATGCCATTGGCATCGTGTGAAAATTTGGAAAATAAATGGTACACAAGTCCTGAGGGAGGTTACACAATATCATCAAATATCTACTGTCTTGGTGTTCTCCTTTTCGAGTTACTTGGTCATTTTGGCTCTGAAAGAACACATATTGTAGCAATGTCTGATCTTCATCATAGGATTCTTCCTCCAATTTTCTTATCAGAAAATCCTAAAGAAGCTGGCTTTTGTCTTTGGCTGCTGCATCCTGAACCATCATCACGTCCTACAACAAGGGAAATCCTTCAATCTGAATTGATTAATGGATTGCAAGAGTTGTTTAATGAGGAATTGTCATCAAGTATTGACCAAGAAGATGCAGAATCAGAATTGTTATTGCATTTCCTCATGTTGTTAAAAGACCAGAAGCAGGACAATGCCGGCAAACTGGTAGAAGAAATCAAGTGCTTGGAATCAGATATAGAAGAGGTGGAGAGGAGGCATGACTCAAGAAAAACCTTGGTTTCCTCTGGCTTGCAGAATGATTACTCTTGTCAGAAAGAGATTATGCCTCTTAAAAAGGAATCTTTGAGTTTGGAAATGCTGCCCTCAATATCACCAATCTCTAATTCAAATGAATTGAGATTGATGAGAAATATATGCCATCTTGAAAGTGCCTATTTTTCCACAAGATCCAAACTTCAGTTTTCTGAAACAGATGCTTCAACTCACCCTGATAAAGATATACTAAGAAATCGTGAGAACTGGTATGTGGCCCAAAAAAGCAAGGAACAACCTAAGAAAGATACTCTAGGGACATTCTTTGATGGTTTGTGCAAGTATGCACGTTATTGCAAGTTTGAAGTGCGGGGTGTACTAAGAAATGCTGACTTTTATAATACTGCAAATGTAATTTGCTCTCTAAGCTTTGACCGGGATGCAGATTACTTTGCTTCTGCAGGGATATCTAAGAAAATAAAAGTTTTTGAGTTTAGTGCACTTTGCAACGACTCTGTTGATATCCATTATCCTGCAGTTGAGATGTCAAACAGATCAAAACTCAGCTGTGTTTGCTGGAATAACTATATTAAGAATTATCTCGCCTCTACAGATTATGACGGTATAGTAAAGTTATGGGATGCTAGTACAGGTCAAGAATTTTCTCAATACACCGAACATGAGAAGAGGGCTTGGTCTGTTGACTTCTCTGCAGTATGCCCTACAAAATTTGCCAGTGGAAGTGATGATTGTACTGTGAAGCTGTGGAGCATCAGTGAGAGAAACTGTTTAGGTACAATCAGGAATCATGCTAATGTCTGCTGTGTTCAGTTCTCTGGTCATTCCTCCCATTTGCTGGCCTTTGGATCTGCGGATTACAAAACATATTGTTATGATCTTCGCAATCTTAGAAGTCCCTGGTGTATATTGGCTGGCCATCGTAAAGCTGTGAGCTATGTCAAATTCTTGGACTCTGAAACCCTTGTTTCTGCTTCTACTGATAATACACTGAAGATCTGGGATCTCAATAAAACCTCTCCTGTGGATGTGGGCACATCCATTAATGCTTGCAGCCTAACCCTATCAGGACATACTAATGAGAAGAATTTTGTGGGTCTATCGGTGGCTGATGGATATATTGCATGTGGTTCAGAAACAAATGAGGTTTACACCTACTATAGATCGCTTCCGATGCCAATCACTTCACACAAGTTTGGGTCCATTGATCCCATTTCTGGTAAAGACACTGATAATGACAATGATCAGTTTGTTTCAAGTGTGTGCTGGAGAGGGAAATCAGACATGCTTATTGCGGCCAATTCAAGTGGATGTGTAAAAGTGTTACAAATGGTTTAA 3357 0.3977 MDEDLIDEATQLEVAEDSQRQNKDSPNTECRKILKSQQEAFIPVKQDYSQIPPREYDNILHGKNVVEGIDHADTSQHVMVEELTVKSYNGSSLDIGTSNNREQMYNQQNHWQNLYQLASNSGIGNSLSDIGTRNSVQATSSAWEDIGSSSFPEMLARKSLSDGQSNVMEHLAAVENKEGAGDVRQGTRTKMISRSGYDFFIKNTLRGKGIVYKGPSSDGFCVQSREQNRTKIGIDADQNRMKTGIGAEQNQMKTVIDTDQNLLKTSIDADQNRMKNVINADQNQMKTGIGTDQNQMKNGIGTDQKQMNTGIGTHLNSNQSVGSKTAKFPSYRGATLRSGRSECDGVTLREWLKHGHHKASKVESLKIFRKIVDLVDNSHSQGVALHNLCPSYIKLTPSNQVTYLGLPVQKQMVESVVNSEVVHIENSFIRKRLSKQVTFPSLDMGSKKQKINEIVRVTGGDMCLETASDRKLHSHTVGSQDYYNEYEEGAQFSKYNIGRMSSIPHVSNAGQMPLASCENLENKWYTSPEGGYTISSNIYCLGVLLFELLGHFGSERTHIVAMSDLHHRILPPIFLSENPKEAGFCLWLLHPEPSSRPTTREILQSELINGLQELFNEELSSSIDQEDAESELLLHFLMLLKDQKQDNAGKLVEEIKCLESDIEEVERRHDSRKTLVSSGLQNDYSCQKEIMPLKKESLSLEMLPSISPISNSNELRLMRNICHLESAYFSTRSKLQFSETDASTHPDKDILRNRENWYVAQKSKEQPKKDTLGTFFDGLCKYARYCKFEVRGVLRNADFYNTANVICSLSFDRDADYFASAGISKKIKVFEFSALCNDSVDIHYPAVEMSNRSKLSCVCWNNYIKNYLASTDYDGIVKLWDASTGQEFSQYTEHEKRAWSVDFSAVCPTKFASGSDDCTVKLWSISERNCLGTIRNHANVCCVQFSGHSSHLLAFGSADYKTYCYDLRNLRSPWCILAGHRKAVSYVKFLDSETLVSASTDNTLKIWDLNKTSPVDVGTSINACSLTLSGHTNEKNFVGLSVADGYIACGSETNEVYTYYRSLPMPITSHKFGSIDPISGKDTDNDNDQFVSSVCWRGKSDMLIAANSSGCVKVLQMV 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1766 1118 SUPERFAMILY Protein kinase-like (PK-like) 343 613 IPR011009 -
Aed11g1766 1118 ProSitePatterns Trp-Asp (WD) repeats signature. 868 882 IPR019775 -
Aed11g1766 1118 MobiDBLite consensus disorder prediction 13 27 - -
Aed11g1766 1118 SMART WD40_4 927 966 IPR001680 GO:0005515
Aed11g1766 1118 SMART WD40_4 1021 1060 IPR001680 GO:0005515
Aed11g1766 1118 SMART WD40_4 1077 1116 IPR001680 GO:0005515
Aed11g1766 1118 SMART WD40_4 841 881 IPR001680 GO:0005515
Aed11g1766 1118 SMART WD40_4 970 1008 IPR001680 GO:0005515
Aed11g1766 1118 SMART WD40_4 787 831 IPR001680 GO:0005515
Aed11g1766 1118 SMART WD40_4 884 924 IPR001680 GO:0005515
Aed11g1766 1118 SUPERFAMILY WD40 repeat-like 804 1114 IPR036322 GO:0005515
Aed11g1766 1118 Pfam WD domain, G-beta repeat 976 1008 IPR001680 GO:0005515
Aed11g1766 1118 Pfam WD domain, G-beta repeat 886 924 IPR001680 GO:0005515
Aed11g1766 1118 ProSitePatterns Trp-Asp (WD) repeats signature. 995 1009 IPR019775 -
Aed11g1766 1118 ProSiteProfiles Trp-Asp (WD) repeats profile. 891 933 IPR001680 GO:0005515
Aed11g1766 1118 Coils Coil 641 668 - -
Aed11g1766 1118 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 977 1010 - -
Aed11g1766 1118 Gene3D Transferase(Phosphotransferase) domain 1 343 617 - -
Aed11g1766 1118 PANTHER PROTEIN SPA1-RELATED 2 1 1118 - -
Aed11g1766 1118 PANTHER PROTEIN SPA1-RELATED 2 1 1118 IPR044630 GO:0009640
Aed11g1766 1118 Gene3D - 775 1118 IPR015943 GO:0005515
Aed11g1766 1118 MobiDBLite consensus disorder prediction 1 27 - -
Aed11g1766 1118 PRINTS G protein beta WD-40 repeat signature 995 1009 IPR020472 -
Aed11g1766 1118 PRINTS G protein beta WD-40 repeat signature 911 925 IPR020472 -
Aed11g1766 1118 PRINTS G protein beta WD-40 repeat signature 868 882 IPR020472 -
Aed11g1766 1118 ProSiteProfiles Trp-Asp (WD) repeats profile. 848 890 IPR001680 GO:0005515
Aed11g1766 1118 ProSiteProfiles Trp-Asp (WD) repeats profile. 977 1017 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1766 Aed-Chr11 21104564 21113263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1766 911 1059 Miscellaneous Gene Families AT5G08390 29.139 1.37e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1766 K16240 - gmx:100784300 2028.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1766 11 21104564 21113263 Aed11g1766 11 21104564 21113263 ECH
Aed11g1766 11 21104564 21113263 Aed5g2346 5 25071452 25077998 PCT